| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g03441 | 3:994,508-997,871 | - | C2H3g02407 | CX3g026290 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| C1H3g10934 | 3:999,392-1,000,895 | - | C2H3g11600 | CX3g025360 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| C1H3g08539 | 3:1,007,973-1,011,218 | + | C2H3g16408 | CX3g028149 | LOC_Os03g02890 | Os03g0120800 | - | Detail |
| C1H3g19352 | 3:1,027,333-1,028,259 | + | C2H3g18948 | CX3g029289 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| C1H3g28264 | 3:1,045,562-1,049,655 | - | C2H3g18738 | CX3g025034 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| C1H3g20047 | 3:1,052,087-1,053,631 | - | C2H3g23557 | CX3g026688 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| C1H3g01141 | 3:1,060,364-1,061,638 | + | C2H3g04065 | CX3g025202 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| C1H3g02111 | 3:1,061,738-1,070,945 | - | C2H3g16968 | CX3g027774 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| C1H3g23785 | 3:1,082,343-1,088,301 | + | C2H3g23905 | CX3g028931 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| C1H3g05090 | 3:1,096,037-1,096,413 | + | C2H3g27024 | - | - | - | - | Detail |
| C1H3g07706 | 3:1,096,600-1,099,509 | + | C2H3g24994 | CX3g026004 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| C1H3g24387 | 3:1,102,330-1,104,223 | - | C2H3g11967 | CX3g025069 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| C1H3g05611 | 3:1,105,304-1,111,129 | - | C2H3g05774 | CX3g031243 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| C1H3g26838 | 3:1,126,687-1,131,268 | - | C2H3g15040 | CX3g027036 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| C1H3g05142 | 3:1,150,988-1,152,633 | - | C2H3g18287 | CX3g025481 | LOC_Os03g03100 | Os03g0834466 | - | Detail |
| C1H3g05064 | 3:1,164,019-1,171,711 | - | C2H9g16327 | CX3g025474 | LOC_Os04g22720 | Os08g0392500 | - | Detail |
| C1H3g18665 | 3:1,174,055-1,174,690 | + | C2H3g16267 | CX3g031045 | - | - | - | Detail |
| C1H3g16789 | 3:1,175,364-1,178,417 | + | C2H3g19854 | CX3g030103 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| C1H3g27844 | 3:1,179,722-1,181,180 | + | C2H3g21601 | CX3g026041 | LOC_Os03g03140 | Os03g0123200 | - | Detail |
| C1H3g09795 | 3:1,184,106-1,188,005 | + | C2H3g04889 | CX3g029979 | LOC_Os03g03150 | Os03g0123300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g14184 | 10:18,292,519-18,293,067 | - | - | CX10g010152 | LOC_Os10g37400 | - | - | Detail |
| C2H10g27960 | 10:18,293,972-18,297,354 | + | C1H10g02443 | CX10g008007 | LOC_Os10g37410 | Os10g0518100 | - | Detail |
| C2H10g20957 | 10:18,297,779-18,300,412 | - | C1H10g22102 | - | LOC_Os10g37420 | Os10g0518200 | OsCYB5-2 | Detail |
| C2H10g24167 | 10:18,300,835-18,305,938 | + | C1H10g22338 | CX10g007992 | LOC_Os10g37430 | Os10g0518300 | - | Detail |
| C2H10g17873 | 10:18,306,909-18,307,664 | + | C1H10g31634 | - | - | Os10g0518400 | - | Detail |
| C2H10g29279 | 10:18,317,026-18,326,536 | + | C1H10g05179 | CX10g008788 | LOC_Os10g37480 | Os10g0518800 | - | Detail |
| C2H10g02307 | 10:18,326,792-18,330,226 | - | C1H10g22916 | CX10g009451 | LOC_Os10g37490 | Os10g0518900 | - | Detail |
| C2H10g17795 | 10:18,347,621-18,349,231 | - | C1H10g18191 | CX10g007388 | LOC_Os10g37500 | Os10g0519300 | - | Detail |
| C2H10g21777 | 10:18,352,967-18,353,215 | - | - | - | - | - | - | Detail |
| C2H10g16387 | 10:18,357,306-18,360,147 | + | C1H10g06914 | CX10g010005 | LOC_Os10g37520 | Os10g0519600 | - | Detail |
| C2H10g07272 | 10:18,361,367-18,361,954 | - | C1H10g13869 | CX10g007889 | LOC_Os10g37530 | Os10g0519700 | - | Detail |
| C2H10g10948 | 10:18,363,995-18,365,308 | + | C1H10g20924 | CX10g010512 | LOC_Os10g37540 | Os10g0519800 | OsFBDUF48, PEG3 | Detail |
| C2H10g15146 | 10:18,370,421-18,371,662 | + | C1H10g12174 | CX10g009421 | LOC_Os10g37570 | Os10g0520100 | - | Detail |
| C2H10g22764 | 10:18,379,229-18,383,565 | - | C1H10g24469 | CX10g008335 | LOC_Os10g37630 | Os10g0520600 | - | Detail |
| C2H10g12638 | 10:18,384,701-18,388,787 | - | C1H10g11518 | CX10g007637 | LOC_Os10g37640 | Os10g0520700 | - | Detail |
| C2H10g11827 | 10:18,390,626-18,393,399 | + | C1H10g27728 | CX10g010627 | LOC_Os10g37650 | Os10g0520900 | - | Detail |
| C2H10g14292 | 10:18,394,285-18,394,496 | - | C1H10g26793 | - | - | Os10g0520950 | - | Detail |
| C2H10g16223 | 10:18,394,537-18,395,338 | - | C1H10g26793 | - | - | Os10g0520950 | - | Detail |
| C2H10g10621 | 10:18,396,967-18,401,572 | - | C1H10g25259 | CX10g007303 | LOC_Os10g37660 | Os10g0521000 | OsTRE1 | Detail |
| C2H10g14236 | 10:18,403,963-18,405,115 | - | C1H10g26387 | CX10g008960 | LOC_Os10g37670 | Os10g0521100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |