| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27090 | 3:850,028-850,639 | + | C2H3g30074 | CX3g029231 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| C1H3g15880 | 3:856,310-860,232 | + | C2H3g15234 | CX3g029442 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| C1H3g16233 | 3:862,627-865,949 | + | C2H3g07784 | CX3g026262 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| C1H3g13017 | 3:869,189-872,675 | + | C2H3g27804 | CX3g031203 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| C1H3g16154 | 3:874,883-875,251 | + | C2H3g24680 | CX3g030967 | LOC_Os03g02685 | Os10g0524300 | OsEMSA1 | Detail |
| C1H3g25055 | 3:876,822-879,754 | + | C2H3g24680 | CX3g030967 | LOC_Os03g02690 | Os03g0118600 | - | Detail |
| C1H3g29819 | 3:880,878-881,723 | + | C2H3g19778 | CX3g029478 | LOC_Os03g02700 | Os10g0524500 | NP1, OsNP1 | Detail |
| C1H3g15623 | 3:881,736-883,129 | + | C2H3g28799 | CX3g029478 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| C1H3g19576 | 3:891,227-896,308 | + | C2H3g12379 | CX3g027174 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| C1H3g18152 | 3:897,548-900,663 | + | C2H3g28095 | CX3g029720 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| C1H3g09297 | 3:901,082-904,667 | - | C2H3g05533 | CX3g029588 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| C1H3g07728 | 3:905,330-909,405 | - | C2H3g14532 | CX3g029171 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| C1H3g23288 | 3:912,695-914,947 | - | C2H3g09524 | CX3g030706 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| C1H3g00618 | 3:927,385-955,923 | + | C2H3g19502 | CX3g030646 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| C1H3g23255 | 3:956,674-957,933 | + | C2H3g11241 | CX3g025079 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| C1H3g13459 | 3:960,163-960,474 | + | C2H3g05811 | CX3g028433 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| C1H3g04574 | 3:969,029-972,980 | + | C2H3g00993 | CX3g026456 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| C1H3g21463 | 3:974,336-977,534 | + | C2H3g24146 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C1H3g16632 | 3:977,917-980,796 | - | C2H3g12012 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C1H3g08934 | 3:982,340-986,225 | - | C2H3g14284 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g18527 | 3:371,901-373,468 | - | C1H3g14852 | CX3g028420 | LOC_Os03g01820 | Os03g0108500 | - | Detail |
| C2H3g29405 | 3:375,381-378,720 | + | C1H3g13700 | CX3g029215 | LOC_Os03g01830 | Os03g0108600 | TCD33, OsBIRH1 | Detail |
| C2H3g30230 | 3:378,766-379,829 | - | C1H3g17215 | CX3g030090 | LOC_Os03g01840 | Os03g0108700 | PACP | Detail |
| C2H3g27460 | 3:381,113-384,534 | + | C1H3g26328 | CX3g025648 | LOC_Os03g01850 | Os03g0118400 | - | Detail |
| C2H3g19354 | 3:390,373-391,447 | + | C1H3g04942 | CX3g026182 | LOC_Os03g01870 | Os03g0109000 | OsNAC055 | Detail |
| C2H3g19398 | 3:402,495-406,787 | + | C1H3g16159 | CX3g028027 | LOC_Os03g01880 | Os03g0109300 | - | Detail |
| C2H3g02704 | 3:416,559-424,651 | + | C1H3g14888 | CX3g025381 | LOC_Os03g01890 | Os03g0109400 | - | Detail |
| C2H3g26914 | 3:425,803-426,237 | - | C1H3g13853 | CX3g027697 | LOC_Os03g01900 | Os03g0109500 | - | Detail |
| C2H3g07050 | 3:426,799-429,094 | - | C1H3g06734 | CX3g030813 | LOC_Os03g01910 | Os03g0109600 | - | Detail |
| C2H3g19994 | 3:429,416-433,038 | - | C1H3g07913 | CX3g025309 | LOC_Os03g01915 | Os03g0109650 | - | Detail |
| C2H3g11912 | 3:434,015-436,770 | - | C1H3g09381 | CX3g026027 | LOC_Os03g01920 | Os03g0109700 | - | Detail |
| C2H3g22613 | 3:437,080-440,033 | + | C1H3g13187 | CX3g029421 | LOC_Os03g01930 | Os03g0109800 | - | Detail |
| C2H3g20578 | 3:444,410-445,228 | + | C1H3g21853 | CX3g026177 | LOC_Os03g01960 | Os03g0110300 | - | Detail |
| C2H3g30307 | 3:452,504-459,514 | + | C1H3g18613 | CX3g028468 | LOC_Os03g01970 | Os03g0110400 | - | Detail |
| C2H3g29785 | 3:460,183-464,589 | + | C1H3g14106 | CX3g031312 | LOC_Os03g01980 | Os03g0110500 | - | Detail |
| C2H3g08775 | 3:469,248-471,914 | + | C1H3g30535 | CX3g029449 | LOC_Os03g01990 | Os03g0699600 | - | Detail |
| C2H3g26504 | 3:478,118-481,862 | + | C1H3g04599 | CX3g031295 | LOC_Os03g02010 | Os03g0110800 | DRM2, OsDRM2, osdrm2 | Detail |
| C2H3g00862 | 3:478,876-479,270 | - | C1H3g23898 | - | - | Os03g0110700 | - | Detail |
| C2H3g03189 | 3:479,452-479,674 | - | C1H3g14665 | - | - | - | - | Detail |
| C2H3g24553 | 3:482,347-484,526 | + | C1H3g22432 | CX3g029772 | LOC_Os03g02020 | Os03g0110900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |