| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g27090 | 3:850,028-850,639 | + | C2H3g30074 | CX3g029231 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| C1H3g15880 | 3:856,310-860,232 | + | C2H3g15234 | CX3g029442 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| C1H3g16233 | 3:862,627-865,949 | + | C2H3g07784 | CX3g026262 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| C1H3g13017 | 3:869,189-872,675 | + | C2H3g27804 | CX3g031203 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| C1H3g16154 | 3:874,883-875,251 | + | C2H3g24680 | CX3g030967 | LOC_Os03g02685 | Os10g0524300 | OsEMSA1 | Detail |
| C1H3g25055 | 3:876,822-879,754 | + | C2H3g24680 | CX3g030967 | LOC_Os03g02690 | Os03g0118600 | - | Detail |
| C1H3g29819 | 3:880,878-881,723 | + | C2H3g19778 | CX3g029478 | LOC_Os03g02700 | Os10g0524500 | NP1, OsNP1 | Detail |
| C1H3g15623 | 3:881,736-883,129 | + | C2H3g28799 | CX3g029478 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| C1H3g19576 | 3:891,227-896,308 | + | C2H3g12379 | CX3g027174 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| C1H3g18152 | 3:897,548-900,663 | + | C2H3g28095 | CX3g029720 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| C1H3g09297 | 3:901,082-904,667 | - | C2H3g05533 | CX3g029588 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| C1H3g07728 | 3:905,330-909,405 | - | C2H3g14532 | CX3g029171 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| C1H3g23288 | 3:912,695-914,947 | - | C2H3g09524 | CX3g030706 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| C1H3g00618 | 3:927,385-955,923 | + | C2H3g19502 | CX3g030646 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| C1H3g23255 | 3:956,674-957,933 | + | C2H3g11241 | CX3g025079 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| C1H3g13459 | 3:960,163-960,474 | + | C2H3g05811 | CX3g028433 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| C1H3g04574 | 3:969,029-972,980 | + | C2H3g00993 | CX3g026456 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| C1H3g21463 | 3:974,336-977,534 | + | C2H3g24146 | - | LOC_Os03g02820 | Os03g0120000 | - | Detail |
| C1H3g16632 | 3:977,917-980,796 | - | C2H3g12012 | CX3g031103 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| C1H3g08934 | 3:982,340-986,225 | - | C2H3g14284 | CX3g026078 | LOC_Os03g02840 | Os03g0120200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g10630 | 2:21,833,033-21,835,295 | + | C1H2g27617 | CX2g023192 | LOC_Os02g38320 | Os02g0596700 | - | Detail |
| C2H2g00192 | 2:21,836,489-21,836,867 | - | C1H2g26547 | CX2g022944 | LOC_Os02g38330 | - | - | Detail |
| C2H2g14667 | 2:21,838,212-21,842,851 | + | C1H2g07087 | CX2g023966 | LOC_Os02g38340 | Os02g0596900 | - | Detail |
| C2H2g08738 | 2:21,843,780-21,845,751 | - | C1H2g18301 | CX2g022445 | LOC_Os02g38350 | Os02g0597000 | - | Detail |
| C2H2g21900 | 2:21,853,827-21,855,366 | + | C1H2g20923 | CX2g023565 | LOC_Os02g38410 | Os02g0597700 | - | Detail |
| C2H2g29854 | 2:21,860,508-21,864,953 | + | C1H2g03167 | CX2g020231 | LOC_Os02g38430 | Os02g0597800 | - | Detail |
| C2H2g21857 | 2:21,865,039-21,868,019 | - | C1H2g26946 | CX2g021825 | LOC_Os02g38440 | Os02g0597900 | - | Detail |
| C2H2g16058 | 2:21,871,501-21,877,090 | - | C1H2g01603 | CX2g020230 | LOC_Os02g38470 | Os02g0598200 | - | Detail |
| C2H2g02822 | 2:21,879,534-21,886,742 | + | C1H2g18211 | CX2g018969 | LOC_Os02g38480 | Os02g0598300 | - | Detail |
| C2H2g11005 | 2:21,880,723-21,885,890 | - | C1H2g08487 | - | - | Os02g0598350 | - | Detail |
| C2H2g02228 | 2:21,887,244-21,892,598 | + | C1H2g27543 | CX2g024573 | LOC_Os02g38490 | Os02g0598800 | - | Detail |
| C2H2g08202 | 2:21,897,470-21,901,023 | + | C1H2g27353 | CX2g024573 | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| C2H2g13348 | 2:21,901,305-21,901,715 | + | C1H2g27353 | CX2g024573 | LOC_Os02g38494 | Os02g0598500 | - | Detail |
| C2H2g10007 | 2:21,903,901-21,904,750 | - | C1H2g20747 | CX2g022751 | LOC_Os02g38589 | Os02g0598900 | - | Detail |
| C2H2g08471 | 2:21,904,861-21,905,196 | - | C1H2g03449 | CX2g022341 | LOC_Os02g38589 | Os02g0598900 | - | Detail |
| C2H2g27496 | 2:21,912,995-21,919,602 | + | C1H2g27543 | CX2g024573 | LOC_Os02g38574 | Os02g0598800 | - | Detail |
| C2H2g16899 | 2:21,920,605-21,925,249 | + | C1H2g27353 | CX2g024573 | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| C2H2g14756 | 2:21,925,928-21,927,299 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| C2H2g21843 | 2:21,926,065-21,927,051 | - | - | - | - | - | - | Detail |
| C2H2g22998 | 2:21,927,457-21,929,188 | + | C1H2g00354 | CX4g035127 | LOC_Os02g38810 | Os02g0600100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |