| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01227 | 3:731,868-732,278 | + | C2H3g26464 | CX3g030673 | LOC_Os03g02400 | Os03g0115000 | - | Detail |
| C1H3g17339 | 3:732,922-738,002 | - | C2H3g20722 | CX3g029693 | LOC_Os03g02410 | Os03g0115100 | - | Detail |
| C1H3g13483 | 3:739,252-740,779 | - | C2H3g13923 | CX3g027454 | LOC_Os03g02420 | Os03g0115200 | - | Detail |
| C1H3g13601 | 3:742,431-743,993 | - | C2H3g21090 | CX3g030326 | LOC_Os03g02430 | Os03g0115300 | - | Detail |
| C1H3g19300 | 3:752,479-757,295 | + | C2H3g04722 | CX3g026894 | LOC_Os03g02440 | Os03g0115400 | - | Detail |
| C1H3g29650 | 3:760,128-762,788 | + | C2H3g02456 | - | LOC_Os03g02450 | Os03g0115500 | - | Detail |
| C1H3g23217 | 3:766,355-768,125 | - | C2H3g18631 | CX3g027733 | LOC_Os03g02460 | Os03g0115700 | - | Detail |
| C1H3g20096 | 3:780,544-784,447 | + | C2H3g08520 | CX3g027934 | LOC_Os03g02480 | Os03g0116000 | - | Detail |
| C1H3g02353 | 3:791,975-797,778 | + | C2H3g18720 | CX3g030191 | LOC_Os03g02514 | Os03g0116300 | - | Detail |
| C1H3g28919 | 3:801,024-803,471 | + | C2H3g12526 | CX3g025863 | LOC_Os03g02530 | Os03g0116400 | - | Detail |
| C1H3g00538 | 3:803,887-807,944 | - | C2H3g29694 | CX3g025869 | LOC_Os03g02540 | Os03g0116500 | OsCSN1 | Detail |
| C1H3g24771 | 3:809,821-810,093 | + | - | CX3g028647 | LOC_Os03g02544 | Os03g0116600 | - | Detail |
| C1H3g22420 | 3:813,623-815,144 | + | C2H3g29079 | CX3g029631 | LOC_Os03g02550 | Os03g0116700 | - | Detail |
| C1H3g28877 | 3:816,407-819,615 | + | C2H3g17551 | CX3g027406 | LOC_Os03g02560 | Os03g0116800 | - | Detail |
| C1H3g19707 | 3:828,732-831,353 | - | C2H3g02337 | CX3g025851 | LOC_Os03g02690 | Os03g0118600 | - | Detail |
| C1H3g30074 | 3:831,363-835,686 | + | C2H3g25975 | CX3g030823 | LOC_Os03g02580 | Os03g0116900 | - | Detail |
| C1H3g17178 | 3:836,306-837,634 | - | C2H3g27471 | CX3g027445 | LOC_Os03g02590 | Os03g0117100 | - | Detail |
| C1H3g12831 | 3:840,321-842,073 | + | C2H3g13914 | CX3g029190 | LOC_Os03g02600 | Os03g0117200 | - | Detail |
| C1H3g08482 | 3:843,814-844,758 | + | C2H3g10644 | CX3g030477 | LOC_Os03g02610 | Os03g0117300 | - | Detail |
| C1H3g14052 | 3:845,755-849,523 | + | C2H3g09711 | CX3g025697 | LOC_Os03g02640 | Os03g0117800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15807 | 2:5,046,468-5,051,199 | + | C1H2g10529 | CX2g019345 | LOC_Os02g10510 | Os02g0198600 | - | Detail |
| C2H2g25569 | 2:5,052,010-5,058,918 | - | C1H2g05539 | CX2g023458 | LOC_Os02g10520 | Os02g0198700 | - | Detail |
| C2H2g18783 | 2:5,072,117-5,073,751 | - | C1H2g08158 | CX2g022114 | LOC_Os02g10540 | Os02g0198900 | - | Detail |
| C2H2g11987 | 2:5,088,073-5,089,026 | - | C1H2g24423 | CX2g023351 | LOC_Os02g10590 | Os02g0199300 | - | Detail |
| C2H2g02789 | 2:5,093,736-5,096,612 | + | C1H2g30492 | CX2g022696 | LOC_Os02g10600 | Os02g0199500 | - | Detail |
| C2H2g20503 | 2:5,097,184-5,098,473 | - | C1H2g18635 | CX2g024334 | - | Os02g0199600 | - | Detail |
| C2H2g05452 | 2:5,104,599-5,110,437 | - | C1H2g14720 | CX2g019312 | LOC_Os02g10630 | Os02g0199800 | - | Detail |
| C2H2g30668 | 2:5,113,316-5,118,771 | - | C1H2g22079 | CX2g022777 | LOC_Os02g10640 | Os02g0199900 | - | Detail |
| C2H2g20119 | 2:5,123,316-5,128,196 | + | C1H2g00290 | CX2g019933 | LOC_Os02g10650 | Os02g0200000 | OsSec14-7 | Detail |
| C2H2g08800 | 2:5,130,998-5,133,053 | - | C1H2g01509 | CX2g020248 | LOC_Os02g10660 | Os02g0200300 | - | Detail |
| C2H2g20788 | 2:5,137,722-5,141,639 | + | C1H2g22046 | CX2g024181 | LOC_Os02g10690 | Os02g0200800 | - | Detail |
| C2H2g24738 | 2:5,142,524-5,145,851 | - | C1H2g10608 | CX2g023893 | LOC_Os02g10700 | Os02g0200900 | - | Detail |
| C2H2g10447 | 2:5,155,962-5,157,179 | - | C1H2g13038 | CX2g018996 | LOC_Os02g10710 | Os02g0758000 | - | Detail |
| C2H2g27059 | 2:5,157,812-5,161,199 | - | C1H2g25618 | CX2g021219 | LOC_Os02g10720 | Os02g0201000 | - | Detail |
| C2H2g02539 | 2:5,185,476-5,186,006 | - | C1H2g23514 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C2H2g22913 | 2:5,201,611-5,204,821 | - | C1H2g23712 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C2H2g21450 | 2:5,220,163-5,220,890 | + | C1H2g24067 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C2H2g30620 | 2:5,225,622-5,228,362 | - | C1H2g20496 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C2H2g13782 | 2:5,235,698-5,238,079 | + | C1H2g04540 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C2H2g29179 | 2:5,239,700-5,268,576 | - | C1H2g00291 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |