| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g09738 | 3:338,317-339,218 | + | C2H3g30259 | CX3g029882 | LOC_Os03g01730 | Os03g0107600 | - | Detail |
| C1H3g00509 | 3:341,973-342,290 | + | C2H3g13144 | CX10g008515 | LOC_Os03g01740 | Os03g0107700 | - | Detail |
| C1H3g25096 | 3:343,295-348,231 | - | C2H3g20378 | CX3g029326 | LOC_Os03g01750 | Os03g0107800 | - | Detail |
| C1H3g17188 | 3:351,202-353,413 | + | C2H3g26807 | CX3g028603 | LOC_Os03g01760 | Os03g0107900 | - | Detail |
| C1H3g00848 | 3:355,066-356,393 | - | C2H3g26003 | CX3g030389 | LOC_Os03g01770 | Os03g0108000 | ACR2.2, CDC25.2, OsACR2.2, OsStr21, STR21 | Detail |
| C1H3g28943 | 3:360,147-360,434 | + | C2H1g20605 | - | LOC_Os05g33670 | Os05g0406550 | - | Detail |
| C1H3g19790 | 3:360,887-365,303 | + | C2H3g05829 | CX3g028464 | LOC_Os03g01790 | Os03g0108200 | - | Detail |
| C1H3g27345 | 3:365,554-366,570 | - | C2H3g04954 | CX3g028491 | LOC_Os03g01800 | Os03g0108300 | OsXTH19 | Detail |
| C1H3g11796 | 3:371,521-373,054 | + | C2H3g18698 | CX3g027775 | LOC_Os03g01810 | Os03g0108400 | - | Detail |
| C1H3g14852 | 3:373,848-375,098 | - | C2H3g18527 | CX3g028420 | LOC_Os03g01820 | Os03g0108500 | - | Detail |
| C1H3g13700 | 3:376,728-380,120 | + | C2H3g29405 | CX3g029215 | LOC_Os03g01830 | Os03g0108600 | TCD33, OsBIRH1 | Detail |
| C1H3g17215 | 3:380,166-381,235 | - | C2H3g30230 | CX3g030090 | LOC_Os03g01840 | Os03g0108700 | PACP | Detail |
| C1H3g26328 | 3:382,524-385,945 | + | C2H3g27460 | CX3g025648 | LOC_Os03g01850 | Os03g0118400 | - | Detail |
| C1H3g04942 | 3:391,626-392,703 | + | C2H3g19354 | CX3g026182 | LOC_Os03g01870 | Os03g0109000 | OsNAC055 | Detail |
| C1H3g16159 | 3:406,119-410,422 | + | C2H3g19398 | CX3g028027 | LOC_Os03g01880 | Os03g0109300 | - | Detail |
| C1H3g14888 | 3:418,402-426,500 | + | C2H3g02704 | CX3g025381 | LOC_Os03g01890 | Os03g0109400 | - | Detail |
| C1H3g13853 | 3:427,649-428,083 | - | C2H3g26914 | CX3g027697 | LOC_Os03g01900 | Os03g0109500 | - | Detail |
| C1H3g06734 | 3:428,652-430,947 | - | C2H3g07050 | CX3g030813 | LOC_Os03g01910 | Os03g0109600 | - | Detail |
| C1H3g07913 | 3:431,647-432,403 | - | C2H3g19994 | CX3g025309 | LOC_Os03g01915 | Os03g0109650 | - | Detail |
| C1H3g09381 | 3:435,425-438,175 | - | C2H3g11912 | CX3g026027 | LOC_Os03g01920 | Os03g0109700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g21542 | 1:32,833,249-32,835,574 | + | C1H1g16825 | CX1g001047 | LOC_Os01g64010 | Os01g0859400 | - | Detail |
| C2H1g11632 | 1:32,839,368-32,843,723 | - | C1H1g23015 | CX1g003099 | LOC_Os01g64020 | Os01g0859500 | OsLG2, rLG2 | Detail |
| C2H1g19694 | 1:32,844,132-32,844,446 | - | C1H1g23015 | - | LOC_Os01g64020 | Os01g0859500 | OsLG2, rLG2 | Detail |
| C2H1g13590 | 1:32,854,526-32,856,398 | + | C1H1g07034 | CX1g006927 | LOC_Os01g64090 | Os01g0860300 | - | Detail |
| C2H1g17934 | 1:32,858,646-32,859,152 | + | C1H1g22082 | CX1g003532 | LOC_Os01g64100 | Os01g0860400 | - | Detail |
| C2H1g12147 | 1:32,859,212-32,859,622 | + | C1H1g27202 | CX1g003532 | LOC_Os01g64100 | Os01g0860400 | - | Detail |
| C2H1g02020 | 1:32,871,496-32,875,877 | + | C1H1g21642 | CX1g004023 | LOC_Os01g71830 | Os01g0860800 | - | Detail |
| C2H1g24709 | 1:32,877,299-32,878,189 | - | C1H1g02555 | CX1g001565 | LOC_Os01g64180 | Os01g0860900 | - | Detail |
| C2H1g12898 | 1:32,886,684-32,890,688 | + | C1H1g19645 | CX1g001303 | LOC_Os01g64250 | Os01g0861700 | - | Detail |
| C2H1g16354 | 1:32,891,415-32,893,098 | - | C1H1g02871 | CX1g000394 | LOC_Os01g64256 | Os01g0861900 | - | Detail |
| C2H1g00349 | 1:32,894,004-32,896,268 | - | C1H1g27132 | CX1g004610 | LOC_Os01g64262 | Os01g0862000 | - | Detail |
| C2H1g29651 | 1:32,896,793-32,897,537 | + | C1H1g31062 | CX1g005876 | LOC_Os01g64270 | Os01g0862200 | - | Detail |
| C2H1g22939 | 1:32,897,637-32,901,901 | - | C1H1g18011 | CX1g004635 | LOC_Os01g64280 | Os01g0862300 | - | Detail |
| C2H1g26579 | 1:32,915,924-32,917,260 | + | C1H1g25790 | CX1g005937 | LOC_Os01g64310 | Os01g0862800 | ENAC1, NAC59 | Detail |
| C2H1g23575 | 1:32,931,609-32,932,380 | + | C1H1g31779 | CX1g004571 | LOC_Os01g64360 | Os01g0863300 | - | Detail |
| C2H1g20445 | 1:32,933,669-32,936,528 | - | C1H1g18221 | CX1g002878 | LOC_Os01g64370 | Os01g0863400 | - | Detail |
| C2H1g29837 | 1:32,938,502-32,939,267 | + | C1H1g03594 | CX1g002036 | - | Os01g0863500 | REL1 | Detail |
| C2H1g03788 | 1:32,984,928-32,991,266 | - | C1H1g31339 | - | - | - | - | Detail |
| C2H1g19719 | 1:32,997,775-33,001,552 | - | C1H1g19766 | CX1g005197 | LOC_Os01g64520 | Os01g0865100 | - | Detail |
| C2H1g23075 | 1:33,012,116-33,017,973 | + | C1H1g22449 | CX1g004450 | LOC_Os01g64560 | Os01g0865600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |