| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g24558 | 3:215,422-216,951 | + | C2H3g00666 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C1H3g28077 | 3:226,654-228,073 | + | C2H3g07381 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C1H3g23454 | 3:230,958-233,218 | - | C2H3g12984 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C1H3g02722 | 3:234,782-238,690 | - | C2H3g00326 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C1H3g03839 | 3:242,866-245,726 | - | C2H3g00355 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C1H3g18280 | 3:247,522-252,767 | - | C2H3g00823 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C1H3g03593 | 3:256,281-260,330 | - | C2H3g10053 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C1H3g13137 | 3:260,921-265,419 | - | C2H3g14376 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| C1H3g09448 | 3:273,006-273,809 | + | C2H3g19859 | CX3g025368 | LOC_Os03g01650 | Os03g0106500 | - | Detail |
| C1H3g20839 | 3:275,633-275,947 | + | C2H3g20988 | - | - | Os03g0106550 | - | Detail |
| C1H3g28471 | 3:278,533-279,336 | + | C2H3g29856 | CX3g030913 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g09211 | 3:284,012-284,815 | + | C2H3g24000 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C1H3g27934 | 3:287,197-288,000 | - | C2H3g19859 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g02983 | 3:291,849-295,865 | - | C2H3g18319 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C1H3g17953 | 3:297,610-299,591 | + | C2H3g12781 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g31596 | 3:299,600-304,440 | + | C2H3g12928 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g21747 | 3:306,940-308,391 | - | C2H3g02258 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C1H3g27800 | 3:315,445-323,364 | + | C2H3g07101 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C1H3g21135 | 3:327,587-331,824 | + | C2H3g28769 | CX3g028047 | LOC_Os03g01720 | Os03g0254900 | - | Detail |
| C1H3g04149 | 3:333,332-334,179 | + | C2H3g28769 | CX3g030693 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g12275 | 1:4,873,374-4,873,817 | - | C1H1g19001 | CX1g000926 | LOC_Os01g10470 | Os01g0201400 | OsRALF17 | Detail |
| C2H1g03634 | 1:4,876,589-4,877,474 | - | C1H1g16523 | CX1g002271 | LOC_Os01g10480 | Os01g0201500 | - | Detail |
| C2H1g24699 | 1:4,882,789-4,883,106 | - | C1H1g23585 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C2H1g28525 | 1:4,883,213-4,883,868 | - | C1H1g14400 | CX1g003008 | LOC_Os01g10490 | Os01g0201600 | OsGAE1 | Detail |
| C2H1g13721 | 1:4,892,989-4,895,492 | - | C1H1g15606 | CX1g006928 | LOC_Os01g10504 | Os01g0886200 | - | Detail |
| C2H1g12459 | 1:4,900,735-4,900,998 | - | C1H1g15606 | CX1g006928 | LOC_Os01g10504 | Os01g0201700 | RAG, MADS3, OsMADS3, OsMADS3(t), RMADS222, RAG1 | Detail |
| C2H1g19665 | 1:4,911,955-4,917,635 | - | C1H1g13227 | CX1g003430 | LOC_Os01g10520 | Os01g0201800 | - | Detail |
| C2H1g09694 | 1:4,923,671-4,931,460 | - | C1H1g22249 | CX1g006334 | LOC_Os01g10530 | Os01g0201900 | - | Detail |
| C2H1g26674 | 1:4,964,371-4,965,624 | + | C1H1g17903 | CX1g001589 | LOC_Os01g10580 | Os01g0202500 | - | Detail |
| C2H1g25575 | 1:4,971,914-4,972,368 | + | C1H1g18982 | - | - | Os01g0202601 | - | Detail |
| C2H1g11027 | 1:4,978,392-4,981,573 | + | C1H1g22813 | CX1g006160 | LOC_Os01g10590 | Os01g0202700 | - | Detail |
| C2H1g23331 | 1:4,988,516-4,991,314 | - | C1H1g30411 | CX1g001315 | LOC_Os01g10600 | Os01g0202800 | OsNIP1;2 | Detail |
| C2H1g21358 | 1:4,992,805-4,994,882 | - | C1H1g09441 | CX1g005369 | LOC_Os01g10610 | Os01g0203000 | - | Detail |
| C2H1g27421 | 1:5,000,254-5,002,198 | - | C1H1g13068 | CX1g004390 | LOC_Os01g10630 | Os01g0203300 | - | Detail |
| C2H1g21431 | 1:5,008,131-5,008,454 | + | - | CX1g004397 | LOC_Os01g10640 | Os01g0203400 | - | Detail |
| C2H1g16935 | 1:5,020,559-5,022,124 | - | C1H1g00815 | CX1g002059 | LOC_Os01g10680 | Os01g0203800 | - | Detail |
| C2H1g16705 | 1:5,041,036-5,045,561 | - | C1H1g30796 | CX1g005785 | LOC_Os01g10690 | Os01g0204000 | - | Detail |
| C2H1g09104 | 1:5,049,551-5,061,780 | - | C1H1g01843 | - | - | - | - | Detail |
| C2H1g25154 | 1:5,062,654-5,063,064 | - | - | CX1g004812 | LOC_Os01g10740 | - | - | Detail |
| C2H1g14777 | 1:5,063,389-5,063,692 | + | C1H1g24281 | CX1g003100 | LOC_Os01g10790 | Os01g0205100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |