| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g24558 | 3:215,422-216,951 | + | C2H3g00666 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C1H3g28077 | 3:226,654-228,073 | + | C2H3g07381 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C1H3g23454 | 3:230,958-233,218 | - | C2H3g12984 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C1H3g02722 | 3:234,782-238,690 | - | C2H3g00326 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C1H3g03839 | 3:242,866-245,726 | - | C2H3g00355 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C1H3g18280 | 3:247,522-252,767 | - | C2H3g00823 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C1H3g03593 | 3:256,281-260,330 | - | C2H3g10053 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C1H3g13137 | 3:260,921-265,419 | - | C2H3g14376 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| C1H3g09448 | 3:273,006-273,809 | + | C2H3g19859 | CX3g025368 | LOC_Os03g01650 | Os03g0106500 | - | Detail |
| C1H3g20839 | 3:275,633-275,947 | + | C2H3g20988 | - | - | Os03g0106550 | - | Detail |
| C1H3g28471 | 3:278,533-279,336 | + | C2H3g29856 | CX3g030913 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g09211 | 3:284,012-284,815 | + | C2H3g24000 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C1H3g27934 | 3:287,197-288,000 | - | C2H3g19859 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g02983 | 3:291,849-295,865 | - | C2H3g18319 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C1H3g17953 | 3:297,610-299,591 | + | C2H3g12781 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g31596 | 3:299,600-304,440 | + | C2H3g12928 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g21747 | 3:306,940-308,391 | - | C2H3g02258 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C1H3g27800 | 3:315,445-323,364 | + | C2H3g07101 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C1H3g21135 | 3:327,587-331,824 | + | C2H3g28769 | CX3g028047 | LOC_Os03g01720 | Os03g0254900 | - | Detail |
| C1H3g04149 | 3:333,332-334,179 | + | C2H3g28769 | CX3g030693 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g00558 | 10:17,376,188-17,379,034 | + | C1H10g27771 | - | LOC_Os10g35520 | Os10g0498200 | - | Detail |
| C2H10g15518 | 10:17,381,761-17,384,126 | + | C1H10g16801 | - | LOC_Os10g35530 | Os10g0498300 | - | Detail |
| C2H10g28078 | 10:17,385,837-17,387,508 | + | C1H10g17250 | - | LOC_Os10g35540 | Os10g0498500 | - | Detail |
| C2H10g22668 | 10:17,390,464-17,393,583 | - | C1H10g06964 | CX10g009252 | LOC_Os10g35550 | Os10g0498600 | Du1, du1 | Detail |
| C2H10g08174 | 10:17,396,088-17,405,188 | + | C1H10g01684 | CX10g010210 | LOC_Os10g35560 | Os10g0498700 | - | Detail |
| C2H10g28876 | 10:17,406,765-17,412,927 | + | C1H10g22397 | CX10g010356 | LOC_Os10g35570 | Os10g0498800 | - | Detail |
| C2H10g15930 | 10:17,413,622-17,415,583 | - | C1H10g09041 | CX10g009857 | LOC_Os10g35580 | Os10g0498900 | - | Detail |
| C2H10g11494 | 10:17,434,836-17,437,279 | + | C1H10g18753 | CX10g007586 | LOC_Os10g35630 | Os10g0499400 | - | Detail |
| C2H10g22460 | 10:17,437,415-17,439,361 | + | C1H10g25155 | CX10g010236 | LOC_Os10g35640 | Os10g0499500 | Rf1b, RF1B | Detail |
| C2H10g14960 | 10:17,444,600-17,447,446 | + | C1H10g27165 | CX10g007650 | LOC_Os10g35644 | Os10g0499600 | - | Detail |
| C2H10g08535 | 10:17,448,573-17,448,854 | + | C1H10g25155 | CX10g007650 | LOC_Os10g35650 | Os10g0499800 | - | Detail |
| C2H10g30611 | 10:17,451,894-17,452,277 | - | - | - | - | Os10g0499700 | - | Detail |
| C2H10g21894 | 10:17,459,956-17,462,346 | + | C1H10g02172 | CX10g009665 | LOC_Os10g35670 | Os10g0500300 | - | Detail |
| C2H10g10046 | 10:17,463,630-17,464,360 | - | C1H10g21272 | CX10g007293 | LOC_Os10g35680 | Os10g0500400 | - | Detail |
| C2H10g24944 | 10:17,469,893-17,473,480 | + | C1H10g25942 | CX10g008660 | LOC_Os10g35690 | Os10g0500500 | - | Detail |
| C2H10g17285 | 10:17,475,304-17,478,280 | + | C1H10g17941 | CX10g008011 | LOC_Os10g35710 | Os10g0500600 | - | Detail |
| C2H10g12281 | 10:17,478,863-17,479,214 | + | C1H10g18442 | - | - | - | - | Detail |
| C2H10g06662 | 10:17,479,613-17,483,141 | + | C1H10g15500 | CX10g008280 | LOC_Os10g35720 | Os10g0500700 | - | Detail |
| C2H10g07237 | 10:17,490,094-17,491,998 | + | C1H10g05883 | CX10g008799 | LOC_Os10g35750 | Os10g0501200 | - | Detail |
| C2H10g07523 | 10:17,493,098-17,495,336 | + | C1H10g24470 | CX10g008091 | LOC_Os10g35760 | Os10g0501300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |