| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g24558 | 3:215,422-216,951 | + | C2H3g00666 | CX3g025803 | - | Os03g0103400 | - | Detail |
| C1H3g28077 | 3:226,654-228,073 | + | C2H3g07381 | CX3g025211 | LOC_Os03g01530 | Os03g0105600 | - | Detail |
| C1H3g23454 | 3:230,958-233,218 | - | C2H3g12984 | CX3g026334 | LOC_Os03g01540 | Os03g0105700 | OsAHL6 | Detail |
| C1H3g02722 | 3:234,782-238,690 | - | C2H3g00326 | CX3g030126 | LOC_Os03g01550 | Os03g0105800 | - | Detail |
| C1H3g03839 | 3:242,866-245,726 | - | C2H3g00355 | CX3g030694 | LOC_Os03g01570 | Os03g0106000 | - | Detail |
| C1H3g18280 | 3:247,522-252,767 | - | C2H3g00823 | CX3g029689 | LOC_Os03g01580 | Os03g0106200 | - | Detail |
| C1H3g03593 | 3:256,281-260,330 | - | C2H3g10053 | CX3g031070 | LOC_Os03g01590 | Os03g0106300 | PAIR1, Pair1 | Detail |
| C1H3g13137 | 3:260,921-265,419 | - | C2H3g14376 | CX3g025678 | LOC_Os03g01600 | Os03g0106400 | OsBCAT1 | Detail |
| C1H3g09448 | 3:273,006-273,809 | + | C2H3g19859 | CX3g025368 | LOC_Os03g01650 | Os03g0106500 | - | Detail |
| C1H3g20839 | 3:275,633-275,947 | + | C2H3g20988 | - | - | Os03g0106550 | - | Detail |
| C1H3g28471 | 3:278,533-279,336 | + | C2H3g29856 | CX3g030913 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g09211 | 3:284,012-284,815 | + | C2H3g24000 | CX3g029182 | LOC_Os03g01640 | Os03g0106800 | - | Detail |
| C1H3g27934 | 3:287,197-288,000 | - | C2H3g19859 | CX3g029495 | LOC_Os03g01610 | Os03g0106900 | - | Detail |
| C1H3g02983 | 3:291,849-295,865 | - | C2H3g18319 | CX3g030834 | LOC_Os03g01660 | Os03g0107000 | - | Detail |
| C1H3g17953 | 3:297,610-299,591 | + | C2H3g12781 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g31596 | 3:299,600-304,440 | + | C2H3g12928 | CX3g025562 | LOC_Os03g01670 | Os03g0107100 | - | Detail |
| C1H3g21747 | 3:306,940-308,391 | - | C2H3g02258 | CX3g026726 | LOC_Os03g01700 | Os03g0107300 | LSI2, Lsi2, SIET1, OsLsi2 | Detail |
| C1H3g27800 | 3:315,445-323,364 | + | C2H3g07101 | CX3g025905 | LOC_Os03g01710 | Os03g0107400 | - | Detail |
| C1H3g21135 | 3:327,587-331,824 | + | C2H3g28769 | CX3g028047 | LOC_Os03g01720 | Os03g0254900 | - | Detail |
| C1H3g04149 | 3:333,332-334,179 | + | C2H3g28769 | CX3g030693 | LOC_Os03g01720 | Os03g0107500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g23215 | 7:2,400,856-2,407,274 | - | C1H7g20992 | CX7g048419 | LOC_Os07g05610 | Os07g0150500 | - | Detail |
| C2H7g26391 | 7:2,408,457-2,409,139 | + | C1H4g05987 | CX7g046244 | - | - | - | Detail |
| C2H7g21271 | 7:2,411,804-2,416,061 | - | C1H7g11750 | CX7g049123 | LOC_Os07g05620 | Os07g0150700 | CIPK23, OsCIPK23, Os-CIPK23 | Detail |
| C2H7g09771 | 7:2,445,966-2,446,196 | - | - | CX7g050005 | - | Os07g0150901 | - | Detail |
| C2H7g02050 | 7:2,461,670-2,462,257 | + | - | CX7g046437 | LOC_Os07g05630 | Os07g0151100 | MIL1, mil1 | Detail |
| C2H7g10221 | 7:2,465,777-2,466,070 | + | - | - | - | - | - | Detail |
| C2H7g18704 | 7:2,466,264-2,467,171 | + | - | CX7g048161 | - | - | - | Detail |
| C2H7g08918 | 7:2,471,399-2,474,604 | + | C1H7g30095 | CX7g046612 | LOC_Os07g05640 | Os07g0151200 | OsINT2 | Detail |
| C2H7g00952 | 7:2,475,731-2,477,451 | + | C1H7g19810 | CX7g046240 | LOC_Os07g05650 | Os07g0151300 | - | Detail |
| C2H7g28976 | 7:2,500,484-2,501,325 | + | C1H7g11755 | CX7g049717 | LOC_Os07g05670 | - | - | Detail |
| C2H7g05765 | 7:2,501,368-2,503,999 | + | C1H7g11755 | - | LOC_Os07g05670 | - | - | Detail |
| C2H7g27358 | 7:2,510,350-2,511,514 | + | C1H7g16809 | CX7g049717 | LOC_Os07g05690 | Os07g0151700 | - | Detail |
| C2H7g21395 | 7:2,515,168-2,516,603 | - | C1H7g19382 | - | LOC_Os07g05700 | Os07g0151800 | - | Detail |
| C2H7g02277 | 7:2,521,221-2,521,599 | - | C1H7g24936 | - | LOC_Os07g05710 | Os07g0151900 | - | Detail |
| C2H7g13193 | 7:2,545,793-2,547,133 | + | C1H7g23187 | CX7g047890 | LOC_Os07g05720 | Os07g0152000 | OsTCP21, TCP21 | Detail |
| C2H7g03119 | 7:2,552,293-2,557,003 | - | C1H7g21805 | CX7g047180 | LOC_Os07g05740 | Os07g0152200 | - | Detail |
| C2H7g05467 | 7:2,556,790-2,557,065 | + | - | - | - | Os07g0152101 | - | Detail |
| C2H7g26144 | 7:2,566,492-2,567,575 | + | C1H7g21910 | CX7g046636 | LOC_Os07g05800 | Os07g0152700 | - | Detail |
| C2H7g03553 | 7:2,568,816-2,575,889 | + | C1H7g31721 | CX7g046057 | LOC_Os07g05820 | Os07g0152900 | - | Detail |
| C2H7g02960 | 7:2,576,200-2,578,314 | - | C1H7g16794 | CX7g047492 | LOC_Os07g05830 | Os07g0153000 | OsJAZ2, OsTIFY5 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |