| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08557 | 1:728,898-736,974 | - | C2H1g24458 | CX1g000582 | LOC_Os01g02760 | Os01g0117000 | - | Detail |
| C1H1g25607 | 1:732,662-736,132 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02770 | Os01g0117100 | - | Detail |
| C1H1g16172 | 1:740,462-741,538 | - | C2H1g24458 | CX1g004882 | LOC_Os01g02780 | Os01g0117200 | - | Detail |
| C1H1g21959 | 1:747,733-751,364 | + | C2H1g00354 | CX1g004864 | LOC_Os01g02790 | Os01g0117266 | - | Detail |
| C1H1g11145 | 1:755,141-759,474 | - | C2H1g01348 | CX1g004882 | LOC_Os01g02800 | Os01g0117400 | - | Detail |
| C1H1g14120 | 1:786,312-787,277 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02810 | Os01g0117500 | - | Detail |
| C1H1g24004 | 1:789,733-793,496 | - | C2H1g30217 | CX1g007103 | LOC_Os01g02860 | - | - | Detail |
| C1H1g14169 | 1:796,717-798,943 | + | C2H1g15563 | CX1g006137 | LOC_Os01g02870 | Os01g0117900 | - | Detail |
| C1H1g19036 | 1:802,243-805,758 | + | C2H1g29553 | CX1g006349 | LOC_Os01g02880 | Os01g0118000 | - | Detail |
| C1H1g31307 | 1:806,706-809,793 | + | - | - | - | Os01g0554150 | - | Detail |
| C1H1g29474 | 1:810,660-820,851 | + | C2H1g08229 | CX1g005801 | LOC_Os01g02884 | Os01g0118100 | - | Detail |
| C1H1g26055 | 1:835,901-842,476 | + | C2H1g02733 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C1H1g13587 | 1:846,726-849,632 | - | C2H1g25728 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C1H1g19340 | 1:863,703-867,080 | - | C2H1g24887 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C1H1g28376 | 1:872,069-874,831 | - | C2H1g16133 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C1H1g06299 | 1:878,642-881,826 | - | C2H1g28060 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C1H1g29708 | 1:890,429-894,356 | - | C2H1g09306 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C1H1g13986 | 1:900,511-901,032 | + | C2H1g08550 | - | - | - | - | Detail |
| C1H1g16487 | 1:903,386-903,544 | - | C2H2g06716 | CX2g022437 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| C1H1g01366 | 1:909,501-910,981 | - | C2H1g12790 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08449 | 3:22,827,032-22,831,992 | - | C1H3g28158 | CX3g025757 | LOC_Os03g43990 | Os03g0767600 | - | Detail |
| C2H3g00183 | 3:22,850,989-22,852,408 | + | C1H3g19477 | CX3g030013 | LOC_Os03g44000 | Os03g0641500 | - | Detail |
| C2H3g23644 | 3:22,857,611-22,860,492 | + | C1H3g24950 | CX3g028634 | LOC_Os03g44010 | Os03g0641700 | - | Detail |
| C2H3g07109 | 3:22,889,008-22,890,955 | - | C1H3g01904 | CX3g026785 | LOC_Os03g52310 | Os03g0563400 | - | Detail |
| C2H3g21207 | 3:22,891,042-22,892,295 | - | C1H3g20730 | CX3g027695 | LOC_Os03g60730 | Os03g0563400 | - | Detail |
| C2H3g10008 | 3:22,892,305-22,893,259 | - | C1H3g06671 | - | - | Os03g0264950 | - | Detail |
| C2H3g18503 | 3:22,894,081-22,894,476 | - | C1H3g27594 | - | - | - | - | Detail |
| C2H3g26081 | 3:22,895,939-22,901,180 | - | C1H3g09156 | CX3g026196 | LOC_Os03g44050 | Os03g0642600 | - | Detail |
| C2H3g02709 | 3:22,904,886-22,908,692 | - | C1H3g16503 | - | LOC_Os03g44100 | Os03g0642900 | - | Detail |
| C2H3g02627 | 3:22,912,590-22,913,452 | - | C1H3g13161 | - | LOC_Os03g44100 | Os03g0642900 | - | Detail |
| C2H3g06223 | 3:22,914,427-22,917,808 | - | C1H3g14328 | - | LOC_Os03g44140 | Os03g0642900 | - | Detail |
| C2H3g22187 | 3:22,920,643-22,922,142 | - | C1H3g14328 | CX3g025236 | LOC_Os03g44140 | Os03g0642600 | - | Detail |
| C2H3g18670 | 3:22,927,303-22,931,403 | - | C1H3g14328 | - | LOC_Os03g44140 | Os03g0643250 | - | Detail |
| C2H3g09910 | 3:22,932,863-22,936,714 | - | C1H3g15657 | CX3g026745 | LOC_Os03g44150 | Os03g0643300 | OsOAT | Detail |
| C2H3g18518 | 3:22,943,140-22,948,525 | + | C1H3g26318 | CX3g026309 | LOC_Os03g44200 | Os03g0644000 | ATG6B, OsATG6b, OsATG6c | Detail |
| C2H3g26037 | 3:22,948,656-22,953,503 | - | C1H3g21507 | CX3g028043 | LOC_Os03g44210 | Os03g0644200 | WAL3 | Detail |
| C2H3g15139 | 3:22,961,489-22,965,453 | - | C1H3g30497 | CX3g027891 | LOC_Os03g44230 | Os03g0644400 | - | Detail |
| C2H3g16289 | 3:22,969,858-22,970,233 | + | - | - | - | - | - | Detail |
| C2H3g27117 | 3:22,992,449-22,993,995 | + | C1H3g27278 | CX3g031229 | LOC_Os03g44260 | Os03g0644700 | - | Detail |
| C2H3g12166 | 3:23,000,746-23,003,472 | + | C1H3g27224 | CX3g025553 | LOC_Os03g44290 | Os03g0645000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |