| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08557 | 1:728,898-736,974 | - | C2H1g24458 | CX1g000582 | LOC_Os01g02760 | Os01g0117000 | - | Detail |
| C1H1g25607 | 1:732,662-736,132 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02770 | Os01g0117100 | - | Detail |
| C1H1g16172 | 1:740,462-741,538 | - | C2H1g24458 | CX1g004882 | LOC_Os01g02780 | Os01g0117200 | - | Detail |
| C1H1g21959 | 1:747,733-751,364 | + | C2H1g00354 | CX1g004864 | LOC_Os01g02790 | Os01g0117266 | - | Detail |
| C1H1g11145 | 1:755,141-759,474 | - | C2H1g01348 | CX1g004882 | LOC_Os01g02800 | Os01g0117400 | - | Detail |
| C1H1g14120 | 1:786,312-787,277 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02810 | Os01g0117500 | - | Detail |
| C1H1g24004 | 1:789,733-793,496 | - | C2H1g30217 | CX1g007103 | LOC_Os01g02860 | - | - | Detail |
| C1H1g14169 | 1:796,717-798,943 | + | C2H1g15563 | CX1g006137 | LOC_Os01g02870 | Os01g0117900 | - | Detail |
| C1H1g19036 | 1:802,243-805,758 | + | C2H1g29553 | CX1g006349 | LOC_Os01g02880 | Os01g0118000 | - | Detail |
| C1H1g31307 | 1:806,706-809,793 | + | - | - | - | Os01g0554150 | - | Detail |
| C1H1g29474 | 1:810,660-820,851 | + | C2H1g08229 | CX1g005801 | LOC_Os01g02884 | Os01g0118100 | - | Detail |
| C1H1g26055 | 1:835,901-842,476 | + | C2H1g02733 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C1H1g13587 | 1:846,726-849,632 | - | C2H1g25728 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C1H1g19340 | 1:863,703-867,080 | - | C2H1g24887 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C1H1g28376 | 1:872,069-874,831 | - | C2H1g16133 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C1H1g06299 | 1:878,642-881,826 | - | C2H1g28060 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C1H1g29708 | 1:890,429-894,356 | - | C2H1g09306 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C1H1g13986 | 1:900,511-901,032 | + | C2H1g08550 | - | - | - | - | Detail |
| C1H1g16487 | 1:903,386-903,544 | - | C2H2g06716 | CX2g022437 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| C1H1g01366 | 1:909,501-910,981 | - | C2H1g12790 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g02406 | 6:27,240,822-27,243,507 | + | C1H6g12891 | CX6g044390 | LOC_Os06g51420 | Os06g0730800 | - | Detail |
| C2H6g15530 | 6:27,244,514-27,249,801 | + | C1H6g28622 | CX6g045534 | LOC_Os06g51430 | Os06g0730900 | - | Detail |
| C2H6g05585 | 6:27,250,503-27,251,141 | + | C1H6g13214 | - | LOC_Os06g51440 | - | - | Detail |
| C2H6g13832 | 6:27,254,465-27,261,999 | - | C1H6g12188 | CX6g042150 | LOC_Os06g51450 | Os06g0731100 | - | Detail |
| C2H6g10366 | 6:27,262,414-27,262,719 | - | C1H6g09799 | CX6g041800 | LOC_Os11g22350 | Os11g0416900 | - | Detail |
| C2H6g06865 | 6:27,262,769-27,265,154 | - | C1H6g09799 | CX6g041800 | LOC_Os06g51460 | Os06g0731200 | - | Detail |
| C2H6g19425 | 6:27,265,716-27,267,359 | - | C1H6g09799 | CX6g041800 | LOC_Os06g51460 | Os06g0731200 | - | Detail |
| C2H6g30273 | 6:27,269,234-27,272,187 | - | C1H6g24296 | CX6g042125 | LOC_Os06g51470 | Os06g0731300 | - | Detail |
| C2H6g29416 | 6:27,273,911-27,276,280 | + | C1H6g11768 | CX6g043131 | LOC_Os06g51480 | Os06g0731400 | - | Detail |
| C2H6g13457 | 6:27,275,940-27,296,170 | - | C1H6g20539 | CX6g043410 | LOC_Os06g51500 | Os06g0731700 | - | Detail |
| C2H6g16231 | 6:27,297,719-27,300,690 | - | C1H6g07471 | CX6g043566 | LOC_Os06g51510 | Os06g0731800 | - | Detail |
| C2H6g08297 | 6:27,301,682-27,307,271 | + | C1H6g22992 | CX6g041312 | LOC_Os06g51520 | Os06g0731900 | - | Detail |
| C2H6g27110 | 6:27,306,413-27,316,627 | - | C1H6g06327 | CX6g045703 | LOC_Os06g51530 | Os06g0731950 | - | Detail |
| C2H7g16450 | 7:42,581-43,537 | - | C1H10g01786 | CX7g048063 | LOC_Os07g01020 | Os07g0100200 | OsPDX1.1 | Detail |
| C2H7g27452 | 7:48,144-52,081 | + | C1H7g25441 | CX7g046291 | LOC_Os07g01030 | Os07g0100300 | - | Detail |
| C2H7g08425 | 7:53,580-59,845 | + | C1H7g03348 | CX7g048072 | LOC_Os07g01060 | Os07g0100500 | - | Detail |
| C2H7g10961 | 7:60,177-61,901 | + | C1H7g20895 | CX7g047094 | LOC_Os07g01070 | Os07g0100600 | - | Detail |
| C2H7g06519 | 7:65,098-69,300 | - | C1H7g21660 | CX7g049424 | LOC_Os07g01090 | Os07g0100800 | OsProT3 | Detail |
| C2H7g12407 | 7:72,968-73,879 | - | C1H7g08235 | CX7g049864 | LOC_Os07g01100 | Os07g0100900 | - | Detail |
| C2H7g26404 | 7:74,589-76,409 | - | C1H7g10223 | CX7g050056 | LOC_Os07g01110 | Os07g0101000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |