| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g08557 | 1:728,898-736,974 | - | C2H1g24458 | CX1g000582 | LOC_Os01g02760 | Os01g0117000 | - | Detail |
| C1H1g25607 | 1:732,662-736,132 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02770 | Os01g0117100 | - | Detail |
| C1H1g16172 | 1:740,462-741,538 | - | C2H1g24458 | CX1g004882 | LOC_Os01g02780 | Os01g0117200 | - | Detail |
| C1H1g21959 | 1:747,733-751,364 | + | C2H1g00354 | CX1g004864 | LOC_Os01g02790 | Os01g0117266 | - | Detail |
| C1H1g11145 | 1:755,141-759,474 | - | C2H1g01348 | CX1g004882 | LOC_Os01g02800 | Os01g0117400 | - | Detail |
| C1H1g14120 | 1:786,312-787,277 | + | C2H1g22757 | CX1g004864 | LOC_Os01g02810 | Os01g0117500 | - | Detail |
| C1H1g24004 | 1:789,733-793,496 | - | C2H1g30217 | CX1g007103 | LOC_Os01g02860 | - | - | Detail |
| C1H1g14169 | 1:796,717-798,943 | + | C2H1g15563 | CX1g006137 | LOC_Os01g02870 | Os01g0117900 | - | Detail |
| C1H1g19036 | 1:802,243-805,758 | + | C2H1g29553 | CX1g006349 | LOC_Os01g02880 | Os01g0118000 | - | Detail |
| C1H1g31307 | 1:806,706-809,793 | + | - | - | - | Os01g0554150 | - | Detail |
| C1H1g29474 | 1:810,660-820,851 | + | C2H1g08229 | CX1g005801 | LOC_Os01g02884 | Os01g0118100 | - | Detail |
| C1H1g26055 | 1:835,901-842,476 | + | C2H1g02733 | - | LOC_Os01g02890 | Os01g0118300 | SUI1, OsSUI1, OsPSS-1, PSS-1, OsPSS1, PSS1 | Detail |
| C1H1g13587 | 1:846,726-849,632 | - | C2H1g25728 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| C1H1g19340 | 1:863,703-867,080 | - | C2H1g24887 | - | LOC_Os01g02910 | Os01g0118600 | - | Detail |
| C1H1g28376 | 1:872,069-874,831 | - | C2H1g16133 | - | LOC_Os01g02920 | Os01g0118700 | - | Detail |
| C1H1g06299 | 1:878,642-881,826 | - | C2H1g28060 | - | LOC_Os01g02930 | Os01g0119000 | - | Detail |
| C1H1g29708 | 1:890,429-894,356 | - | C2H1g09306 | - | LOC_Os01g02940 | Os01g0119100 | - | Detail |
| C1H1g13986 | 1:900,511-901,032 | + | C2H1g08550 | - | - | - | - | Detail |
| C1H1g16487 | 1:903,386-903,544 | - | C2H2g06716 | CX2g022437 | LOC_Os10g02680 | Os10g0116300 | - | Detail |
| C1H1g01366 | 1:909,501-910,981 | - | C2H1g12790 | - | LOC_Os01g02900 | Os01g0118400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15230 | 5:23,167,027-23,168,937 | + | - | - | - | - | - | Detail |
| C2H5g04318 | 5:23,171,248-23,173,305 | + | C1H5g03876 | CX5g037582 | LOC_Os05g48320 | Os05g0557000 | - | Detail |
| C2H5g27989 | 5:23,173,820-23,177,222 | - | C1H5g30394 | CX5g039564 | LOC_Os05g48330 | Os05g0557100 | - | Detail |
| C2H5g12748 | 5:23,183,844-23,189,167 | + | C1H5g07029 | CX5g039452 | LOC_Os05g48340 | Os05g0557200 | - | Detail |
| C2H5g05831 | 5:23,191,712-23,195,067 | - | C1H5g15077 | CX5g040314 | LOC_Os05g48360 | Os05g0557400 | - | Detail |
| C2H5g12137 | 5:23,196,911-23,199,613 | - | C1H5g30428 | CX5g038427 | LOC_Os05g48370 | Os05g0557500 | - | Detail |
| C2H5g10055 | 5:23,200,501-23,204,959 | - | C1H5g24254 | CX5g039930 | LOC_Os05g48380 | Os05g0557600 | - | Detail |
| C2H5g25746 | 5:23,206,512-23,214,667 | - | C1H5g01069 | CX5g041031 | LOC_Os05g48390 | Os05g0557700 | LTN1, PHO2.2 | Detail |
| C2H5g26773 | 5:23,222,969-23,225,459 | - | C1H5g26384 | CX5g036872 | LOC_Os05g48410 | Os05g0557800 | - | Detail |
| C2H5g03768 | 5:23,226,059-23,229,161 | - | C1H5g08534 | CX5g040711 | LOC_Os05g48416 | Os05g0557900 | - | Detail |
| C2H5g19124 | 5:23,230,795-23,232,045 | - | C1H5g13071 | CX5g037638 | LOC_Os05g48422 | Os05g0558000 | - | Detail |
| C2H5g11101 | 5:23,243,006-23,243,791 | - | C1H5g24420 | CX5g040952 | LOC_Os05g48489 | Os05g0457800 | - | Detail |
| C2H5g00508 | 5:23,244,106-23,250,113 | + | C1H5g06098 | CX5g037184 | LOC_Os05g48450 | Os05g0558400 | OsBCAT4 | Detail |
| C2H5g28108 | 5:23,255,492-23,255,881 | - | C1H5g05403 | CX9g057071 | LOC_Os05g48480 | Os05g0353100 | - | Detail |
| C2H5g13714 | 5:23,258,767-23,263,640 | + | C1H5g08257 | CX5g039815 | LOC_Os05g48500 | Os05g0558800 | - | Detail |
| C2H5g18563 | 5:23,266,183-23,272,680 | + | C1H5g19475 | CX5g038975 | LOC_Os05g48510 | Os05g0558900 | - | Detail |
| C2H5g19891 | 5:23,272,885-23,274,753 | - | C1H5g12218 | CX5g038139 | LOC_Os05g48520 | Os05g0559000 | - | Detail |
| C2H5g17680 | 5:23,288,779-23,289,265 | - | C1H5g10473 | CX5g039256 | LOC_Os05g48570 | Os05g0559316 | - | Detail |
| C2H5g06270 | 5:23,294,102-23,295,184 | - | C1H5g08715 | CX5g038826 | LOC_Os05g48580 | Os05g0559350 | - | Detail |
| C2H5g14650 | 5:23,300,524-23,304,607 | - | C1H5g27784 | CX5g039828 | LOC_Os05g48590 | Os05g0559400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |