| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17381 | 3:91,885-92,302 | - | C2H3g00405 | CX3g025489 | LOC_Os03g01140 | Os03g0101000 | - | Detail |
| C1H3g21267 | 3:93,891-97,768 | + | C2H3g18212 | CX3g029599 | LOC_Os03g01150 | Os03g0101100 | - | Detail |
| C1H3g29573 | 3:97,673-101,671 | - | C2H3g24205 | CX3g030198 | LOC_Os03g01160 | Os03g0101200 | - | Detail |
| C1H3g22019 | 3:105,501-108,460 | - | C2H3g02388 | CX3g030753 | LOC_Os03g01170 | Os03g0101300 | - | Detail |
| C1H3g22515 | 3:110,566-112,211 | - | C2H3g13566 | CX3g030969 | LOC_Os03g01180 | Os03g0101500 | - | Detail |
| C1H3g10161 | 3:112,505-122,141 | - | C2H3g27968 | CX3g028165 | LOC_Os03g01190 | Os03g0101600 | - | Detail |
| C1H3g10633 | 3:127,172-129,107 | + | C2H3g26911 | CX3g025690 | LOC_Os03g01210 | Os03g0101800 | - | Detail |
| C1H3g06917 | 3:131,198-135,101 | + | C2H3g12060 | CX3g029047 | LOC_Os03g01216 | Os03g0101900 | - | Detail |
| C1H3g00218 | 3:136,057-139,222 | + | C2H3g00981 | CX3g027602 | LOC_Os03g01222 | Os03g0102100 | - | Detail |
| C1H3g25020 | 3:139,497-139,992 | + | C2H3g00981 | CX3g027602 | LOC_Os03g01230 | Os03g0102200 | - | Detail |
| C1H3g05989 | 3:144,120-145,453 | + | C2H3g16038 | CX3g029938 | LOC_Os03g01240 | Os03g0102300 | - | Detail |
| C1H3g16074 | 3:152,867-154,906 | + | C2H3g16038 | CX3g029938 | LOC_Os03g01240 | Os03g0102333 | - | Detail |
| C1H3g05608 | 3:156,546-160,521 | + | C2H3g07325 | CX3g029938 | LOC_Os03g01240 | Os03g0102366 | - | Detail |
| C1H3g25301 | 3:160,940-166,247 | - | C2H3g23495 | CX3g027923 | LOC_Os03g01250 | Os03g0102400 | - | Detail |
| C1H3g20737 | 3:169,996-170,856 | - | C2H3g09146 | CX3g028399 | LOC_Os03g01260 | Os03g0102500 | - | Detail |
| C1H3g18000 | 3:175,530-177,277 | + | C2H3g19463 | CX3g030913 | LOC_Os03g01270 | Os03g0102700 | OsEXPB7 | Detail |
| C1H3g03491 | 3:185,959-187,024 | + | C2H3g08091 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C1H3g16425 | 3:188,066-189,290 | + | C2H3g08091 | CX3g027138 | LOC_Os03g01290 | Os03g0103000 | - | Detail |
| C1H3g01568 | 3:193,134-193,559 | + | C2H3g24645 | CX3g025864 | LOC_Os03g01300 | Os03g0103100 | - | Detail |
| C1H3g18184 | 3:206,204-206,818 | + | C2H3g27129 | CX3g025864 | LOC_Os03g01320 | Os03g0103300 | qLTG-3-1(t), qLTG-3-1(t), qLTG3-1, OsHyPRP05, OsHyPRP5, HyP/GRP05, HyP/GRP5 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g12617 | 7:4,402,162-4,409,124 | + | C1H7g27182 | CX7g050262 | LOC_Os07g09060 | Os07g0188800 | - | Detail |
| C2H7g25185 | 7:4,413,171-4,413,491 | - | C1H7g18343 | CX7g046385 | - | - | - | Detail |
| C2H7g28551 | 7:4,416,571-4,418,243 | - | C1H7g00471 | CX7g050068 | LOC_Os07g09120 | - | - | Detail |
| C2H7g19166 | 7:4,428,285-4,429,645 | + | C1H7g03181 | CX7g047473 | LOC_Os07g09140 | Os07g0189700 | - | Detail |
| C2H7g28408 | 7:4,429,816-4,431,833 | - | C1H7g25864 | CX7g046048 | LOC_Os07g09150 | Os07g0189800 | - | Detail |
| C2H7g24230 | 7:4,522,524-4,525,258 | + | C1H7g20037 | CX7g048358 | LOC_Os07g09190 | Os07g0190000 | OsDXS3 | Detail |
| C2H7g18700 | 7:4,531,755-4,533,663 | - | C1H7g23271 | CX7g049011 | - | Os07g0190650 | - | Detail |
| C2H7g22120 | 7:4,534,229-4,543,701 | - | C1H7g26325 | CX7g047379 | LOC_Os07g09310 | Os07g0190800 | - | Detail |
| C2H7g02397 | 7:4,543,666-4,547,086 | + | C1H7g18263 | CX7g050122 | LOC_Os07g09330 | Os07g0191000 | - | Detail |
| C2H7g01228 | 7:4,568,068-4,574,515 | + | C1H7g09411 | CX7g046991 | LOC_Os07g09340 | Os07g0191200 | - | Detail |
| C2H7g23021 | 7:4,575,713-4,577,365 | + | C1H7g20986 | CX7g048544 | LOC_Os07g09370 | Os07g0191500 | - | Detail |
| C2H7g20885 | 7:4,580,350-4,581,724 | + | C1H7g12747 | CX7g046027 | LOC_Os07g09384 | Os07g0191600 | STR2 | Detail |
| C2H7g10398 | 7:4,583,547-4,586,121 | + | C1H7g06329 | CX7g047220 | - | Os07g0288700 | - | Detail |
| C2H7g01978 | 7:4,587,398-4,588,083 | + | C1H7g03523 | CX7g049537 | - | Os07g0191650 | - | Detail |
| C2H7g16742 | 7:4,591,388-4,604,540 | + | C1H7g22549 | CX7g046218 | LOC_Os07g09400 | Os07g0191700 | - | Detail |
| C2H7g04372 | 7:4,609,835-4,611,385 | + | C1H7g14179 | CX7g047455 | LOC_Os07g09420 | Os07g0192000 | - | Detail |
| C2H7g17581 | 7:4,616,405-4,618,604 | - | C1H7g13496 | CX7g047390 | LOC_Os07g09450 | Os07g0192300 | NAL11, LM7, LM7/OsHSP40 | Detail |
| C2H7g01624 | 7:4,635,299-4,636,999 | + | C1H7g14179 | CX7g046871 | LOC_Os07g09470 | Os07g0192700 | - | Detail |
| C2H7g27766 | 7:4,640,668-4,642,251 | + | C1H7g14179 | CX7g046439 | LOC_Os07g09480 | Os07g0192700 | - | Detail |
| C2H7g17159 | 7:4,646,951-4,648,456 | - | C1H7g14179 | CX7g049104 | LOC_Os07g09490 | Os07g0192800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |