| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g08130 | 2:32,834,879-32,835,550 | + | C2H2g02163 | CX2g020743 | - | - | - | Detail |
| C1H2g23825 | 2:32,836,146-32,838,778 | + | C2H2g23373 | CX2g020873 | LOC_Os02g58660 | Os02g0833500 | - | Detail |
| C1H2g00990 | 2:32,845,752-32,846,539 | - | C2H2g03257 | CX2g021157 | LOC_Os02g58670 | Os02g0833600 | - | Detail |
| C1H2g03772 | 2:32,852,744-32,853,905 | + | C2H2g10544 | CX2g022094 | LOC_Os02g58720 | Os02g0833900 | - | Detail |
| C1H2g11657 | 2:32,858,143-32,862,254 | + | C2H2g16606 | CX2g020759 | LOC_Os02g58730 | Os02g0834000 | - | Detail |
| C1H2g28385 | 2:32,865,891-32,866,723 | - | C2H2g00908 | CX2g019767 | LOC_Os02g58740 | Os02g0834300 | - | Detail |
| C1H2g12235 | 2:32,871,240-32,878,032 | + | C2H2g09948 | CX2g023144 | LOC_Os02g58790 | Os02g0834700 | - | Detail |
| C1H2g23557 | 2:32,879,489-32,879,957 | - | - | CX2g019589 | - | - | - | Detail |
| C1H3g12473 | 3:19,167-21,502 | + | C2H3g08981 | CX3g025409 | LOC_Os03g01008 | Os03g0100010 | - | Detail |
| C1H3g31569 | 3:23,070-23,894 | - | C2H3g23710 | CX3g025646 | LOC_Os03g01012 | Os03g0100020 | OsTET4 | Detail |
| C1H3g23303 | 3:28,454-31,865 | + | C2H3g06479 | CX3g029008 | LOC_Os03g01014 | Os03g0100030 | OsG | Detail |
| C1H3g16601 | 3:33,165-34,307 | + | C2H3g18625 | CX3g028519 | LOC_Os03g01018 | Os03g0100040 | - | Detail |
| C1H3g04046 | 3:34,448-37,529 | - | C2H3g06216 | CX3g030591 | LOC_Os03g01016 | Os03g0100050 | - | Detail |
| C1H3g07060 | 3:40,319-40,918 | + | C2H3g04061 | CX3g030970 | LOC_Os03g01020 | Os03g0100100 | OsPMEI12 | Detail |
| C1H3g18524 | 3:41,154-41,840 | - | C2H3g15971 | CX3g030306 | - | Os03g0100200 | - | Detail |
| C1H3g15772 | 3:45,323-47,690 | + | C2H3g14193 | CX3g030081 | LOC_Os03g01090 | Os03g0100300 | - | Detail |
| C1H3g08646 | 3:48,257-53,596 | + | C2H3g15742 | CX3g031055 | LOC_Os03g01100 | Os03g0100400 | - | Detail |
| C1H3g24675 | 3:53,887-72,297 | + | C2H3g23110 | CX3g028450 | LOC_Os03g01110 | Os03g0100500 | - | Detail |
| C1H3g24264 | 3:76,677-86,434 | + | C2H3g21128 | CX3g030861 | LOC_Os03g01120 | Os03g0100800 | Os-HA1, OsA8 | Detail |
| C1H3g03122 | 3:87,894-91,224 | + | C2H3g05265 | CX3g028755 | LOC_Os03g01130 | Os03g0100900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g16814 | 7:1,778,483-1,779,316 | + | C1H7g06819 | CX7g047555 | LOC_Os07g04560 | Os07g0138200 | ONAC096 | Detail |
| C2H7g02439 | 7:1,783,996-1,792,470 | + | C1H4g13233 | - | - | - | - | Detail |
| C2H7g25936 | 7:1,792,813-1,801,603 | + | C1H6g23444 | CX7g046261 | - | - | - | Detail |
| C2H7g26836 | 7:1,808,981-1,814,958 | - | C1H7g17083 | CX7g046833 | LOC_Os07g04580 | Os07g0138400 | C3H47, OsC3H47, OsCCCH-Zn-10 | Detail |
| C2H7g19383 | 7:1,816,460-1,818,350 | - | C1H7g01306 | CX7g046833 | LOC_Os07g04590 | - | - | Detail |
| C2H7g11152 | 7:1,819,906-1,823,420 | - | C1H7g16871 | - | LOC_Os07g04630 | - | - | Detail |
| C2H7g24974 | 7:1,828,924-1,829,530 | + | C1H4g02573 | CX7g048152 | - | - | - | Detail |
| C2H7g18198 | 7:1,833,392-1,834,376 | + | C1H4g01835 | - | - | - | - | Detail |
| C2H7g02398 | 7:1,845,383-1,849,175 | - | C1H7g27897 | CX7g047102 | LOC_Os07g04860 | Os07g0541600 | - | Detail |
| C2H7g26055 | 7:1,857,781-1,859,442 | - | C1H7g19541 | CX7g049140 | LOC_Os07g04650 | Os07g0139000 | - | Detail |
| C2H7g26853 | 7:1,860,970-1,861,797 | - | C1H7g20593 | CX7g046643 | - | - | - | Detail |
| C2H7g03846 | 7:1,862,964-1,863,794 | - | - | CX7g048585 | LOC_Os07g04670 | Os07g0139300 | G1, g1 (lng), lng, g1, ELE | Detail |
| C2H7g30228 | 7:1,875,604-1,878,952 | + | C1H7g02240 | CX7g048151 | LOC_Os07g04690 | Os07g0139400 | - | Detail |
| C2H7g01643 | 7:1,880,089-1,887,899 | - | C1H7g29385 | CX7g048919 | LOC_Os07g04700 | Os07g0139500 | - | Detail |
| C2H7g15273 | 7:1,889,014-1,889,639 | - | C1H7g23711 | - | - | - | - | Detail |
| C2H7g29767 | 7:1,890,418-1,891,356 | + | - | - | LOC_Os07g04720 | - | - | Detail |
| C2H7g00736 | 7:1,902,167-1,902,553 | - | C1H7g28886 | CX7g047674 | - | Os07g0140566 | - | Detail |
| C2H7g19248 | 7:1,911,826-1,913,327 | - | C1H7g26824 | CX7g049463 | LOC_Os07g04810 | Os07g0141100 | MAK9 | Detail |
| C2H7g14424 | 7:1,922,986-1,924,431 | - | C1H7g15614 | CX7g049744 | LOC_Os07g04820 | Os07g0141200 | OsSPL26 | Detail |
| C2H7g12770 | 7:1,927,285-1,928,853 | - | C1H7g19398 | CX7g049078 | LOC_Os07g04840 | Os07g0141400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |