| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g25769 | 2:32,571,699-32,577,450 | - | C2H2g13358 | CX2g021298 | LOC_Os02g58120 | Os02g0827600 | - | Detail |
| C1H2g29575 | 2:32,580,811-32,583,705 | - | C2H2g22309 | CX2g020130 | LOC_Os02g58160 | Os02g0828100 | - | Detail |
| C1H2g09988 | 2:32,586,171-32,588,310 | + | C2H2g24086 | CX2g022711 | LOC_Os02g58150 | Os02g0828200 | - | Detail |
| C1H2g12011 | 2:32,591,196-32,592,455 | + | C2H2g01735 | CX2g024386 | LOC_Os02g58170 | Os02g0828500 | - | Detail |
| C1H2g26132 | 2:32,617,330-32,623,972 | + | C2H2g21040 | CX2g022618 | LOC_Os02g58210 | Os02g0828900 | - | Detail |
| C1H2g13644 | 2:32,637,224-32,639,591 | - | C2H2g26830 | CX2g022289 | LOC_Os02g58220 | Os02g0829100 | OsRPA2, OsRPA32 | Detail |
| C1H2g17512 | 2:32,640,122-32,645,228 | - | C2H2g22612 | CX2g024162 | LOC_Os02g58230 | Os02g0829200 | - | Detail |
| C1H2g22040 | 2:32,646,624-32,650,422 | + | C2H2g08873 | CX2g021877 | LOC_Os02g58250 | Os02g0829400 | - | Detail |
| C1H2g19670 | 2:32,650,860-32,653,490 | - | C2H2g06590 | CX2g020227 | LOC_Os02g58260 | Os02g0829500 | - | Detail |
| C1H2g11754 | 2:32,653,970-32,658,116 | - | C2H2g01627 | CX2g023481 | LOC_Os02g58280 | Os02g0829600 | - | Detail |
| C1H2g28907 | 2:32,664,956-32,666,637 | - | C2H2g27848 | CX2g019654 | - | Os02g0829900 | - | Detail |
| C1H2g19195 | 2:32,666,828-32,668,324 | + | C2H2g28475 | CX2g023390 | LOC_Os02g58330 | Os02g0830000 | - | Detail |
| C1H2g15905 | 2:32,668,512-32,673,490 | - | C2H2g28933 | CX2g021002 | LOC_Os02g58340 | Os02g0830100 | - | Detail |
| C1H2g26748 | 2:32,674,509-32,675,296 | - | C2H2g24710 | CX2g021148 | LOC_Os02g58350 | Os02g0830200 | RR3, OSRR3, OsRR3, rr3, Rra7, OsRRA7 | Detail |
| C1H2g04850 | 2:32,677,911-32,684,398 | - | C2H2g15978 | CX2g019480 | LOC_Os02g58360 | Os02g0830300 | - | Detail |
| C1H2g17677 | 2:32,690,894-32,691,812 | - | C2H2g05318 | CX2g019366 | LOC_Os02g58390 | Os02g0655800 | - | Detail |
| C1H2g28740 | 2:32,693,791-32,695,215 | - | C2H2g05318 | CX2g019366 | LOC_Os02g58390 | Os02g0830700 | - | Detail |
| C1H2g11087 | 2:32,703,060-32,716,283 | + | C2H2g10655 | CX2g020528 | LOC_Os02g58410 | Os02g0830900 | - | Detail |
| C1H2g31609 | 2:32,717,026-32,720,622 | + | C2H2g19559 | CX2g021714 | LOC_Os02g58440 | Os02g0831100 | - | Detail |
| C1H2g06401 | 2:32,720,901-32,722,402 | - | C2H2g28296 | CX2g024319 | LOC_Os02g58450 | Os02g0831200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26747 | 1:10,200,153-10,206,924 | - | C1H1g06389 | CX1g000991 | LOC_Os01g20160 | Os01g0307500 | SKC1, OsHKT1;5 | Detail |
| C2H1g25693 | 1:10,229,966-10,234,877 | - | C1H1g23404 | CX1g002251 | - | Os01g0307562 | - | Detail |
| C2H1g30004 | 1:10,238,711-10,240,379 | - | C1H1g16008 | CX1g001704 | LOC_Os01g20206 | Os01g0716500 | - | Detail |
| C2H1g16831 | 1:10,254,022-10,254,630 | - | - | CX1g004373 | - | - | - | Detail |
| C2H1g12164 | 1:10,309,362-10,310,343 | + | C1H1g09566 | CX1g001078 | LOC_Os01g20830 | Os01g0309800 | - | Detail |
| C2H1g25285 | 1:10,312,181-10,312,708 | - | C1H1g12067 | - | - | Os12g0238400 | - | Detail |
| C2H1g06659 | 1:10,317,954-10,321,711 | + | C1H1g13090 | CX1g001846 | LOC_Os01g20840 | Os01g0309900 | - | Detail |
| C2H1g26562 | 1:10,323,590-10,334,801 | - | C1H1g24589 | CX1g001918 | LOC_Os01g20860 | Os01g0310100 | - | Detail |
| C2H1g11171 | 1:10,357,037-10,357,636 | + | C1H1g15351 | CX1g005110 | LOC_Os01g20880 | Os01g0310500 | - | Detail |
| C2H1g17166 | 1:10,359,031-10,361,429 | + | C1H1g24151 | CX1g002504 | LOC_Os01g20880 | Os01g0310800 | - | Detail |
| C2H1g25968 | 1:10,369,411-10,370,224 | - | - | - | - | - | - | Detail |
| C2H1g04294 | 1:10,374,670-10,390,910 | + | C1H1g03706 | CX1g005596 | LOC_Os01g20940 | Os01g0311500 | - | Detail |
| C2H1g02829 | 1:10,395,448-10,396,164 | + | C1H1g01250 | CX1g000747 | LOC_Os01g20970 | Os01g0311700 | OsPMEI3 | Detail |
| C2H1g13458 | 1:10,397,195-10,399,672 | - | C1H1g26546 | CX1g006521 | LOC_Os01g20980 | Os01g0311800 | - | Detail |
| C2H1g09479 | 1:10,416,030-10,424,796 | + | C1H1g11820 | CX1g005083 | LOC_Os01g21034 | Os01g0312500 | PME42 | Detail |
| C2H1g04512 | 1:10,431,140-10,433,635 | + | C1H1g17184 | CX1g001330 | LOC_Os01g21070 | Os01g0312800 | - | Detail |
| C2H1g03011 | 1:10,450,177-10,451,235 | + | C1H1g08378 | CX1g006367 | LOC_Os01g21120 | Os01g0313300 | - | Detail |
| C2H1g01551 | 1:10,458,368-10,463,230 | - | C1H1g06744 | CX1g004973 | LOC_Os01g21144 | Os01g0314000 | - | Detail |
| C2H1g09093 | 1:10,463,966-10,468,875 | - | C1H1g26432 | CX1g005719 | LOC_Os01g21160 | Os01g0314100 | - | Detail |
| C2H1g08211 | 1:10,470,666-10,474,110 | + | C1H1g14129 | - | - | Os01g0540400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |