| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12168 | 2:31,736,917-31,739,125 | + | C2H2g15313 | CX2g019555 | LOC_Os02g56700 | Os02g0811800 | OsCCR10 | Detail |
| C1H2g01325 | 2:31,740,230-31,740,869 | - | C2H2g23157 | - | LOC_Os02g46300 | Os02g0811902 | - | Detail |
| C1H2g10464 | 2:31,742,310-31,743,894 | + | C2H2g09312 | CX2g024617 | LOC_Os02g56720 | Os02g0812000 | - | Detail |
| C1H2g05404 | 2:31,748,738-31,757,287 | + | C2H2g19326 | CX2g024879 | LOC_Os02g56740 | Os02g0812400 | - | Detail |
| C1H2g10963 | 2:31,758,666-31,760,820 | + | C2H2g02254 | CX2g023091 | LOC_Os02g56750 | Os02g0812500 | - | Detail |
| C1H2g03230 | 2:31,762,377-31,766,397 | + | C2H2g09710 | CX2g023091 | LOC_Os02g56760 | Os02g0812600 | - | Detail |
| C1H2g07056 | 2:31,766,489-31,768,453 | + | C2H2g19171 | CX2g023091 | LOC_Os02g56800 | Os02g0812700 | - | Detail |
| C1H2g00231 | 2:31,771,702-31,773,544 | + | C2H2g28532 | CX2g023091 | LOC_Os02g56810 | Os02g0813083 | - | Detail |
| C1H2g26554 | 2:31,775,160-31,775,381 | + | C2H2g15955 | CX2g023249 | LOC_Os02g56820 | Os02g0812600 | - | Detail |
| C1H2g30055 | 2:31,778,369-31,781,518 | + | C2H2g15955 | CX2g023249 | LOC_Os02g56820 | Os02g0813000 | - | Detail |
| C1H2g14316 | 2:31,781,804-31,782,883 | + | C2H2g28568 | CX2g023249 | LOC_Os02g56820 | Os02g0813166 | - | Detail |
| C1H2g25793 | 2:31,786,177-31,787,244 | + | C2H2g25608 | CX2g023249 | LOC_Os02g56840 | Os02g0813350 | - | Detail |
| C1H2g01150 | 2:31,787,648-31,788,043 | + | C2H2g25608 | CX2g023091 | LOC_Os02g56840 | Os02g0813350 | - | Detail |
| C1H2g13338 | 2:31,790,001-31,795,459 | + | C2H2g15090 | CX2g022536 | LOC_Os02g56850 | Os02g0813500 | - | Detail |
| C1H2g08319 | 2:31,813,603-31,822,320 | - | C2H2g05971 | CX2g019469 | LOC_Os02g56880 | Os02g0813800 | - | Detail |
| C1H2g07591 | 2:31,828,112-31,828,988 | - | C2H2g25448 | CX2g020760 | LOC_Os02g56900 | Os02g0814000 | - | Detail |
| C1H2g24252 | 2:31,831,105-31,837,050 | - | C2H2g26120 | CX2g020572 | LOC_Os02g56910 | Os02g0814100 | - | Detail |
| C1H2g00197 | 2:31,838,250-31,842,164 | - | C2H2g25119 | CX2g021462 | LOC_Os02g56920 | Os02g0814200 | - | Detail |
| C1H2g09332 | 2:31,852,015-31,852,587 | - | C2H7g04062 | CX8g051856 | - | - | - | Detail |
| C1H2g20033 | 2:31,852,690-31,853,359 | - | C2H7g18912 | CX2g022162 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17957 | 12:19,825,339-19,828,955 | - | - | - | - | - | - | Detail |
| C2H12g00857 | 12:19,836,424-19,839,405 | - | C1H12g12899 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C2H12g17120 | 12:19,843,002-19,846,719 | - | C1H12g10259 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C2H12g04894 | 12:19,854,539-19,857,748 | - | C1H12g21793 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C2H12g26878 | 12:19,862,311-19,865,959 | - | C1H12g30700 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C2H12g26810 | 12:19,867,353-19,873,882 | - | C1H12g05519 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C2H12g06238 | 12:19,875,946-19,878,170 | + | C1H12g22000 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C2H12g22098 | 12:19,879,316-19,887,066 | + | C1H12g15638 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C2H12g08874 | 12:19,892,972-19,894,012 | + | C1H12g30406 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C2H12g22738 | 12:19,915,029-19,920,428 | + | C1H12g21439 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C2H12g29158 | 12:19,921,945-19,924,327 | - | C1H12g00519 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C2H12g06115 | 12:19,928,181-19,934,490 | - | C1H12g00369 | CX12g015574 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| C2H12g21149 | 12:19,948,275-19,950,104 | - | C1H12g31425 | CX12g017526 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| C2H12g11743 | 12:19,951,241-19,951,904 | + | C1H12g00225 | CX12g015487 | - | Os12g0530100 | - | Detail |
| C2H12g17013 | 12:19,954,198-19,958,515 | + | C1H12g19103 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C2H12g27102 | 12:19,961,689-19,962,201 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g04289 | 12:19,962,292-19,966,033 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g06963 | 12:19,966,563-19,970,812 | + | C1H12g22422 | CX12g017088 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| C2H12g18495 | 12:19,971,081-19,976,738 | - | C1H12g15232 | CX12g016623 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| C2H12g09933 | 12:19,980,215-19,981,300 | - | C1H12g27740 | CX12g015550 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |