| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05302 | 2:31,520,431-31,522,927 | - | C2H2g04085 | CX2g019099 | LOC_Os02g56630 | Os02g0811200 | - | Detail |
| C1H2g01711 | 2:31,528,931-31,530,485 | - | C2H2g14829 | CX2g024895 | LOC_Os02g56680 | Os02g0811400 | - | Detail |
| C1H2g25927 | 2:31,538,064-31,539,587 | - | C2H2g09964 | CX2g023560 | LOC_Os02g56480 | Os02g0809100 | - | Detail |
| C1H2g00539 | 2:31,556,493-31,558,714 | + | C2H2g05475 | CX2g020953 | LOC_Os02g56500 | Os02g0809500 | OsSEC24 | Detail |
| C1H2g03941 | 2:31,558,737-31,559,080 | + | C2H2g05475 | CX2g020953 | LOC_Os02g56500 | Os02g0809500 | OsSEC24 | Detail |
| C1H2g08370 | 2:31,569,626-31,575,153 | + | C2H2g26800 | CX2g019552 | LOC_Os02g56510 | Os02g0809800 | PHO1;2, OsPHO1;2 | Detail |
| C1H2g13536 | 2:31,575,169-31,578,767 | - | C2H2g22393 | CX2g021231 | LOC_Os02g56520 | Os02g0809900 | - | Detail |
| C1H2g21189 | 2:31,579,867-31,584,046 | - | C2H2g05657 | CX2g020383 | LOC_Os02g56530 | Os02g0810100 | - | Detail |
| C1H2g07640 | 2:31,589,590-31,593,808 | + | C2H2g09102 | CX2g023309 | LOC_Os02g56540 | Os02g0810200 | STD1 | Detail |
| C1H2g31061 | 2:31,594,689-31,597,714 | + | C2H2g09184 | CX2g021152 | LOC_Os02g56550 | Os02g0810300 | OsABCI15 | Detail |
| C1H2g29463 | 2:31,601,732-31,610,383 | + | C2H2g08532 | CX2g023904 | LOC_Os02g56560 | Os02g0810400 | - | Detail |
| C1H2g17936 | 2:31,611,286-31,615,012 | + | C2H2g16022 | CX2g022596 | LOC_Os02g56570 | Os02g0810500 | - | Detail |
| C1H2g20971 | 2:31,622,137-31,622,656 | + | C2H2g16022 | CX2g024714 | LOC_Os02g56580 | Os02g0810600 | - | Detail |
| C1H2g28748 | 2:31,635,972-31,638,279 | + | C2H2g20484 | CX2g020604 | LOC_Os02g56600 | Os02g0810900 | - | Detail |
| C1H2g13041 | 2:31,670,549-31,671,056 | - | C2H2g14230 | - | - | Os02g0811101 | - | Detail |
| C1H2g00270 | 2:31,673,007-31,673,414 | + | C2H2g01916 | - | - | - | - | Detail |
| C1H2g11260 | 2:31,676,263-31,680,124 | + | C2H2g05949 | CX2g020564 | LOC_Os02g56420 | Os02g0807900 | - | Detail |
| C1H2g25312 | 2:31,715,102-31,717,700 | + | C2H2g04085 | CX2g019099 | LOC_Os02g56630 | Os02g0811200 | - | Detail |
| C1H2g05066 | 2:31,726,456-31,727,868 | + | C2H2g14829 | CX2g024895 | LOC_Os02g56680 | Os02g0811400 | - | Detail |
| C1H2g24089 | 2:31,732,383-31,733,839 | + | C2H2g21626 | CX2g022856 | LOC_Os02g56690 | Os02g0811800 | OsCCR10 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30640 | 4:1,719,255-1,723,962 | + | C1H4g17799 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C2H4g19144 | 4:1,739,532-1,740,113 | - | C1H4g19447 | CX4g034832 | - | - | - | Detail |
| C2H4g05610 | 4:1,764,995-1,767,457 | + | C1H4g23533 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C2H4g00703 | 4:1,777,022-1,779,592 | - | C1H4g07028 | CX4g035198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g09916 | 4:1,791,202-1,791,932 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g15842 | 4:1,841,229-1,843,356 | + | C1H4g07028 | CX4g032198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g06784 | 4:1,926,268-1,927,874 | + | C1H4g07028 | CX4g034389 | LOC_Os04g04670 | Os04g0136000 | - | Detail |
| C2H4g27188 | 4:1,989,202-1,989,675 | - | - | CX4g032153 | - | - | - | Detail |
| C2H4g18525 | 4:2,014,982-2,015,732 | - | - | CX4g034918 | - | - | - | Detail |
| C2H4g26240 | 4:2,023,261-2,024,654 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C2H4g08696 | 4:2,025,532-2,026,003 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| C2H4g14822 | 4:2,053,699-2,054,665 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g13248 | 4:2,075,582-2,078,396 | - | C1H4g07691 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C2H4g08946 | 4:2,087,740-2,089,679 | + | C1H4g00435 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C2H4g24029 | 4:2,119,317-2,124,783 | + | C1H4g17319 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C2H4g03790 | 4:2,139,695-2,140,441 | - | C1H4g22056 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C2H4g29226 | 4:2,148,952-2,152,002 | + | C1H4g09732 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C2H4g11106 | 4:2,167,536-2,167,985 | - | - | - | - | - | - | Detail |
| C2H4g03441 | 4:2,178,143-2,186,459 | - | C1H4g13170 | CX4g035554 | LOC_Os04g05470 | Os04g0140400 | - | Detail |
| C2H4g16775 | 4:2,186,503-2,187,141 | - | C1H4g07028 | CX4g035554 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |