| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05302 | 2:31,520,431-31,522,927 | - | C2H2g04085 | CX2g019099 | LOC_Os02g56630 | Os02g0811200 | - | Detail |
| C1H2g01711 | 2:31,528,931-31,530,485 | - | C2H2g14829 | CX2g024895 | LOC_Os02g56680 | Os02g0811400 | - | Detail |
| C1H2g25927 | 2:31,538,064-31,539,587 | - | C2H2g09964 | CX2g023560 | LOC_Os02g56480 | Os02g0809100 | - | Detail |
| C1H2g00539 | 2:31,556,493-31,558,714 | + | C2H2g05475 | CX2g020953 | LOC_Os02g56500 | Os02g0809500 | OsSEC24 | Detail |
| C1H2g03941 | 2:31,558,737-31,559,080 | + | C2H2g05475 | CX2g020953 | LOC_Os02g56500 | Os02g0809500 | OsSEC24 | Detail |
| C1H2g08370 | 2:31,569,626-31,575,153 | + | C2H2g26800 | CX2g019552 | LOC_Os02g56510 | Os02g0809800 | PHO1;2, OsPHO1;2 | Detail |
| C1H2g13536 | 2:31,575,169-31,578,767 | - | C2H2g22393 | CX2g021231 | LOC_Os02g56520 | Os02g0809900 | - | Detail |
| C1H2g21189 | 2:31,579,867-31,584,046 | - | C2H2g05657 | CX2g020383 | LOC_Os02g56530 | Os02g0810100 | - | Detail |
| C1H2g07640 | 2:31,589,590-31,593,808 | + | C2H2g09102 | CX2g023309 | LOC_Os02g56540 | Os02g0810200 | STD1 | Detail |
| C1H2g31061 | 2:31,594,689-31,597,714 | + | C2H2g09184 | CX2g021152 | LOC_Os02g56550 | Os02g0810300 | OsABCI15 | Detail |
| C1H2g29463 | 2:31,601,732-31,610,383 | + | C2H2g08532 | CX2g023904 | LOC_Os02g56560 | Os02g0810400 | - | Detail |
| C1H2g17936 | 2:31,611,286-31,615,012 | + | C2H2g16022 | CX2g022596 | LOC_Os02g56570 | Os02g0810500 | - | Detail |
| C1H2g20971 | 2:31,622,137-31,622,656 | + | C2H2g16022 | CX2g024714 | LOC_Os02g56580 | Os02g0810600 | - | Detail |
| C1H2g28748 | 2:31,635,972-31,638,279 | + | C2H2g20484 | CX2g020604 | LOC_Os02g56600 | Os02g0810900 | - | Detail |
| C1H2g13041 | 2:31,670,549-31,671,056 | - | C2H2g14230 | - | - | Os02g0811101 | - | Detail |
| C1H2g00270 | 2:31,673,007-31,673,414 | + | C2H2g01916 | - | - | - | - | Detail |
| C1H2g11260 | 2:31,676,263-31,680,124 | + | C2H2g05949 | CX2g020564 | LOC_Os02g56420 | Os02g0807900 | - | Detail |
| C1H2g25312 | 2:31,715,102-31,717,700 | + | C2H2g04085 | CX2g019099 | LOC_Os02g56630 | Os02g0811200 | - | Detail |
| C1H2g05066 | 2:31,726,456-31,727,868 | + | C2H2g14829 | CX2g024895 | LOC_Os02g56680 | Os02g0811400 | - | Detail |
| C1H2g24089 | 2:31,732,383-31,733,839 | + | C2H2g21626 | CX2g022856 | LOC_Os02g56690 | Os02g0811800 | OsCCR10 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g26883 | 3:30,547,135-30,556,048 | - | C1H3g06142 | CX3g030682 | LOC_Os03g58600 | Os03g0800200 | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1 | Detail |
| C2H3g21138 | 3:30,562,282-30,563,610 | - | C1H3g31832 | CX3g025373 | LOC_Os03g58610 | Os03g0800400 | - | Detail |
| C2H3g28024 | 3:30,564,726-30,567,455 | - | C1H3g31832 | CX3g025373 | LOC_Os03g58620 | Os03g0800500 | - | Detail |
| C2H3g18555 | 3:30,568,209-30,570,049 | - | C1H3g31423 | CX3g026714 | LOC_Os03g58630 | Os03g0800700 | - | Detail |
| C2H3g28838 | 3:30,570,586-30,579,205 | - | C1H3g10764 | CX3g026264 | LOC_Os03g58640 | Os03g0800800 | - | Detail |
| C2H3g01155 | 3:30,580,828-30,581,365 | + | C1H3g02255 | - | - | Os03g0800900 | - | Detail |
| C2H3g25793 | 3:30,581,538-30,582,987 | + | C1H3g00648 | CX3g026772 | LOC_Os03g58690 | Os03g0801500 | - | Detail |
| C2H3g23292 | 3:30,584,427-30,584,737 | - | - | CX3g029458 | - | - | - | Detail |
| C2H3g03346 | 3:30,584,935-30,593,066 | + | C1H3g06085 | CX3g030423 | LOC_Os03g58700 | Os03g0801600 | - | Detail |
| C2H3g21897 | 3:30,593,373-30,596,684 | - | C1H3g07389 | CX3g026599 | LOC_Os03g58710 | Os03g0801700 | - | Detail |
| C2H3g02470 | 3:30,597,752-30,604,986 | + | C1H3g31741 | CX3g026853 | LOC_Os03g58720 | Os03g0801800 | - | Detail |
| C2H3g24055 | 3:30,607,479-30,608,920 | + | C1H3g13444 | CX3g028194 | LOC_Os03g58740 | Os03g0801900 | - | Detail |
| C2H3g06737 | 3:30,628,338-30,628,673 | + | C1H3g24645 | CX3g027259 | LOC_Os03g58764 | - | - | Detail |
| C2H3g22987 | 3:30,630,696-30,637,023 | - | C1H3g27952 | CX3g026467 | LOC_Os03g58780 | Os03g0802300 | - | Detail |
| C2H3g07093 | 3:30,645,433-30,647,570 | + | C1H3g23323 | CX3g029310 | LOC_Os03g58800 | Os03g0802600 | - | Detail |
| C2H3g04258 | 3:30,647,332-30,651,291 | - | C1H3g23165 | CX3g031125 | LOC_Os03g58810 | Os03g0802700 | - | Detail |
| C2H3g14685 | 3:30,651,840-30,658,004 | - | C1H3g24318 | CX3g026858 | LOC_Os03g58820 | Os03g0802800 | - | Detail |
| C2H3g17538 | 3:30,658,053-30,658,757 | - | - | - | - | - | - | Detail |
| C2H3g03398 | 3:30,658,875-30,662,606 | - | C1H3g09968 | CX3g029318 | LOC_Os03g58830 | Os03g0802900 | - | Detail |
| C2H3g17483 | 3:30,664,745-30,667,942 | + | C1H3g24192 | CX3g027749 | LOC_Os03g58840 | Os03g0803000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |