| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g20898 | 2:31,367,850-31,370,126 | - | C2H2g06439 | CX2g022953 | LOC_Os02g56150 | Os02g0805300 | - | Detail |
| C1H2g18555 | 2:31,373,176-31,375,483 | - | C2H2g01737 | CX2g022826 | LOC_Os02g56170 | Os02g0805500 | - | Detail |
| C1H2g30498 | 2:31,378,367-31,380,618 | + | C2H2g08494 | CX2g020022 | LOC_Os02g56180 | Os02g0805600 | - | Detail |
| C1H2g02350 | 2:31,381,270-31,382,900 | - | C2H2g14716 | CX2g021343 | LOC_Os02g56190 | Os02g0805700 | - | Detail |
| C1H2g23840 | 2:31,383,258-31,389,303 | - | C2H2g17986 | CX2g020646 | LOC_Os02g56200 | Os02g0805800 | - | Detail |
| C1H2g23237 | 2:31,393,505-31,396,843 | - | C2H2g24720 | CX2g023787 | LOC_Os02g56210 | Os02g0805900 | - | Detail |
| C1H2g02510 | 2:31,397,085-31,401,094 | + | C2H2g30362 | CX2g019538 | LOC_Os02g56219 | Os02g0806000 | - | Detail |
| C1H2g15285 | 2:31,416,451-31,421,745 | + | C2H2g18959 | CX2g020018 | LOC_Os02g56250 | Os02g0645600 | - | Detail |
| C1H2g12003 | 2:31,423,263-31,424,279 | - | C2H2g08061 | CX2g023472 | LOC_Os02g56260 | Os02g0806500 | - | Detail |
| C1H2g24733 | 2:31,424,347-31,426,131 | - | C2H2g09745 | CX2g023472 | LOC_Os02g56260 | Os02g0806500 | - | Detail |
| C1H2g09037 | 2:31,429,378-31,435,106 | - | C2H2g16259 | CX2g020940 | LOC_Os02g56270 | Os02g0806600 | - | Detail |
| C1H2g15153 | 2:31,442,825-31,447,593 | - | C2H2g09054 | CX2g022386 | LOC_Os02g56280 | Os02g0806700 | - | Detail |
| C1H2g31054 | 2:31,459,697-31,463,803 | + | C2H2g30201 | CX2g020392 | LOC_Os02g56300 | Os02g0806900 | - | Detail |
| C1H2g07550 | 2:31,467,183-31,468,931 | - | C2H2g10670 | CX2g019216 | LOC_Os02g56310 | Os02g0807000 | - | Detail |
| C1H2g30707 | 2:31,475,748-31,483,317 | + | C2H2g10723 | CX2g020511 | LOC_Os02g56320 | Os02g0807100 | SSIV-3 | Detail |
| C1H2g23003 | 2:31,483,310-31,485,889 | - | C2H2g00256 | CX2g022097 | LOC_Os02g56350 | Os02g0807200 | - | Detail |
| C1H2g13515 | 2:31,494,431-31,497,365 | - | C2H2g07924 | CX2g020564 | LOC_Os02g56370 | Os02g0807800 | - | Detail |
| C1H2g00695 | 2:31,502,516-31,505,046 | - | C2H2g21237 | CX2g022097 | LOC_Os02g56380 | Os02g0807900 | - | Detail |
| C1H2g05480 | 2:31,508,096-31,510,573 | - | C2H2g00256 | CX2g022097 | LOC_Os02g56400 | Os02g0808100 | - | Detail |
| C1H2g01106 | 2:31,517,828-31,518,313 | - | C2H2g11198 | CX2g024895 | LOC_Os02g56680 | Os02g0811400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19636 | 1:24,164,635-24,167,712 | + | C1H1g10753 | - | - | - | - | Detail |
| C2H1g09086 | 1:24,168,411-24,173,039 | + | C1H1g04478 | CX1g004981 | LOC_Os01g47550 | Os01g0665400 | - | Detail |
| C2H1g17277 | 1:24,180,315-24,182,593 | - | C1H1g10117 | CX1g003271 | LOC_Os01g47560 | Os01g0665500 | - | Detail |
| C2H1g27651 | 1:24,203,297-24,203,866 | + | C1H5g16562 | CX1g005881 | LOC_Os01g47570 | Os01g0665900 | - | Detail |
| C2H1g23227 | 1:24,214,499-24,216,777 | - | C1H1g10117 | CX1g003271 | LOC_Os01g47560 | Os01g0665500 | - | Detail |
| C2H1g07602 | 1:24,237,481-24,238,050 | + | C1H5g16562 | CX1g005881 | LOC_Os01g47570 | Os01g0665900 | - | Detail |
| C2H1g09620 | 1:24,244,266-24,248,032 | - | C1H1g08061 | CX1g002701 | LOC_Os01g47580 | Os01g0666000 | - | Detail |
| C2H1g30465 | 1:24,260,561-24,263,590 | + | C1H1g22272 | CX1g004856 | LOC_Os01g47600 | Os01g0666200 | - | Detail |
| C2H1g20315 | 1:24,264,372-24,265,373 | - | C1H1g06997 | CX1g005148 | LOC_Os01g47610 | Os01g0666400 | - | Detail |
| C2H1g08177 | 1:24,267,739-24,270,039 | - | C1H1g13794 | CX1g001286 | LOC_Os01g47620 | Os01g0666500 | - | Detail |
| C2H1g01833 | 1:24,270,431-24,271,909 | + | C1H1g13937 | CX1g005667 | LOC_Os01g47630 | Os01g0666600 | - | Detail |
| C2H1g10090 | 1:24,272,628-24,273,746 | - | C1H1g31496 | CX1g005314 | LOC_Os01g47635 | Os01g0895300 | - | Detail |
| C2H1g17250 | 1:24,280,437-24,289,706 | + | C1H1g09475 | CX1g003969 | LOC_Os01g47650 | Os01g0666800 | - | Detail |
| C2H1g08141 | 1:24,290,061-24,291,566 | - | C1H1g19365 | CX1g006414 | LOC_Os01g47660 | Os01g0752300 | - | Detail |
| C2H1g30375 | 1:24,292,389-24,293,594 | - | C1H1g20685 | CX1g001813 | LOC_Os01g47670 | Os01g0667000 | - | Detail |
| C2H1g05332 | 1:24,294,931-24,297,066 | - | C1H1g10556 | CX5g037646 | LOC_Os01g47680 | Os01g0667100 | - | Detail |
| C2H1g14901 | 1:24,297,965-24,301,741 | - | C1H1g23877 | CX1g007099 | LOC_Os01g47690 | Os01g0667200 | - | Detail |
| C2H1g27855 | 1:24,305,119-24,308,392 | + | C1H1g07341 | CX1g002938 | LOC_Os01g47700 | Os01g0172600 | - | Detail |
| C2H1g30150 | 1:24,314,883-24,318,716 | - | C1H1g07732 | CX1g001501 | LOC_Os01g47710 | Os01g0667400 | DWT1, OsWOX7, Os WOX7, WOX7, OsWOX9A | Detail |
| C2H1g17608 | 1:24,333,416-24,334,475 | + | C1H1g06325 | CX1g007033 | LOC_Os01g47730 | Os01g0667600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |