| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g23112 | 2:30,408,594-30,412,425 | - | C2H2g09783 | CX2g021182 | LOC_Os02g54340 | Os02g0784700 | OsRpt1b | Detail |
| C1H2g28654 | 2:30,415,098-30,415,571 | - | C2H2g10153 | CX2g021993 | LOC_Os02g54360 | Os02g0784900 | - | Detail |
| C1H2g22630 | 2:30,433,013-30,433,533 | + | C2H2g09400 | CX2g022096 | LOC_Os02g54470 | Os02g0785800 | - | Detail |
| C1H2g16607 | 2:30,435,796-30,444,084 | + | C2H2g24301 | CX2g021693 | LOC_Os02g54490 | Os02g0785900 | - | Detail |
| C1H2g04640 | 2:30,445,408-30,453,758 | + | C2H2g16599 | CX2g024703 | LOC_Os02g54500 | Os02g0786000 | - | Detail |
| C1H2g14270 | 2:30,458,900-30,465,191 | + | C2H2g21668 | CX2g019009 | LOC_Os02g54510 | Os02g0786200 | - | Detail |
| C1H2g29436 | 2:30,472,896-30,475,639 | + | C2H2g02803 | CX2g024716 | LOC_Os02g54520 | Os02g0786400 | OsMYB36b | Detail |
| C1H2g24406 | 2:30,477,708-30,478,244 | + | C2H2g17562 | CX2g020901 | LOC_Os02g54530 | Os02g0786500 | - | Detail |
| C1H2g01457 | 2:30,480,583-30,481,101 | + | C2H2g10089 | CX2g020901 | LOC_Os02g54540 | Os02g0786500 | - | Detail |
| C1H2g05721 | 2:30,488,497-30,491,965 | + | C2H2g14363 | CX2g022090 | LOC_Os02g54580 | Os02g0787100 | - | Detail |
| C1H2g17039 | 2:30,492,852-30,496,738 | + | C2H2g16691 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C1H2g05584 | 2:30,513,703-30,518,398 | + | C2H2g29050 | CX2g023310 | LOC_Os02g54624 | Os02g0787500 | - | Detail |
| C1H2g10849 | 2:30,528,605-30,534,672 | + | C2H2g09069 | CX2g019134 | LOC_Os02g54640 | Os02g0787600 | - | Detail |
| C1H2g10467 | 2:30,536,161-30,543,205 | - | C2H2g02130 | CX2g020090 | LOC_Os02g54650 | Os02g0787800 | - | Detail |
| C1H2g21285 | 2:30,549,087-30,550,939 | + | C2H2g22539 | CX2g023353 | LOC_Os02g54690 | Os02g0788300 | - | Detail |
| C1H2g03966 | 2:30,551,689-30,553,752 | + | C2H2g09842 | CX2g020480 | LOC_Os02g54700 | Os02g0788400 | - | Detail |
| C1H2g22475 | 2:30,554,253-30,556,057 | - | C2H2g24143 | CX2g024078 | LOC_Os02g54710 | Os02g0788500 | - | Detail |
| C1H2g09302 | 2:30,562,552-30,565,888 | - | C2H2g15656 | CX2g019873 | LOC_Os02g54720 | Os02g0788600 | - | Detail |
| C1H2g25640 | 2:30,571,429-30,577,692 | - | C2H2g25995 | CX2g020788 | LOC_Os02g54730 | Os02g0788800 | - | Detail |
| C1H2g12627 | 2:30,580,917-30,586,293 | - | C2H2g28930 | CX2g023773 | LOC_Os02g54760 | Os02g0789100 | OsCNGC10 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23186 | 1:27,269,220-27,271,527 | + | C1H1g25026 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C2H1g16933 | 1:27,272,531-27,277,968 | - | C1H1g17481 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C2H1g28398 | 1:27,285,980-27,289,362 | + | C1H1g18098 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C2H1g03923 | 1:27,293,250-27,293,800 | + | C1H1g05786 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| C2H1g19534 | 1:27,304,010-27,311,886 | + | C1H1g09802 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C2H1g09241 | 1:27,326,536-27,327,972 | + | C1H1g16727 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C2H1g27577 | 1:27,338,608-27,340,083 | + | C1H1g17596 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C2H1g28000 | 1:27,363,984-27,365,414 | - | C1H1g12410 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C2H1g20968 | 1:27,364,009-27,365,288 | + | - | - | - | Os01g0735450 | - | Detail |
| C2H1g21886 | 1:27,365,328-27,367,380 | + | - | - | - | - | - | Detail |
| C2H1g03039 | 1:27,370,524-27,371,948 | - | C1H1g11199 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C2H1g19693 | 1:27,379,721-27,381,136 | - | C1H1g10989 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C2H1g23129 | 1:27,381,416-27,384,963 | + | C1H1g04228 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C2H1g09664 | 1:27,386,344-27,387,096 | + | C1H1g11257 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C2H1g22559 | 1:27,401,377-27,403,368 | + | C1H1g18188 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C2H1g29848 | 1:27,411,208-27,418,789 | + | C1H1g17501 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C2H1g21171 | 1:27,420,379-27,421,816 | + | C1H1g26053 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C2H1g23141 | 1:27,421,843-27,422,460 | + | C1H1g26053 | CX1g007234 | - | Os01g0221600 | OsALMT4 | Detail |
| C2H1g28481 | 1:27,428,371-27,429,000 | + | C1H1g28789 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C2H1g06822 | 1:27,430,737-27,435,013 | - | C1H1g20246 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |