| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00649 | 2:29,999,638-30,003,526 | - | C2H2g14687 | CX2g021737 | LOC_Os02g53620 | Os02g0776400 | OsNF-YA11 | Detail |
| C1H2g09960 | 2:30,014,522-30,019,389 | + | C2H2g18316 | CX2g020408 | LOC_Os02g53670 | Os02g0776700 | - | Detail |
| C1H2g17006 | 2:30,019,559-30,023,381 | - | C2H2g00569 | CX2g019149 | LOC_Os02g53680 | Os02g0776800 | - | Detail |
| C1H2g31437 | 2:30,026,363-30,028,340 | - | C2H2g17721 | CX2g021217 | LOC_Os02g53690 | Os02g0776900 | - | Detail |
| C1H2g17671 | 2:30,040,201-30,052,465 | - | C2H2g26729 | CX2g024173 | LOC_Os02g53700 | Os02g0777100 | - | Detail |
| C1H2g07904 | 2:30,070,219-30,077,660 | + | C2H2g10741 | CX2g022446 | LOC_Os02g53720 | Os02g0777400 | OsER2 | Detail |
| C1H2g13209 | 2:30,082,694-30,099,801 | + | C2H2g16530 | CX2g020126 | LOC_Os02g53740 | Os02g0777700 | - | Detail |
| C1H2g24043 | 2:30,100,747-30,103,548 | - | C2H2g28341 | CX2g020656 | LOC_Os02g53750 | Os02g0777800 | - | Detail |
| C1H2g30598 | 2:30,116,954-30,128,025 | + | C2H2g04031 | CX2g022211 | LOC_Os02g53770 | Os02g0778200 | - | Detail |
| C1H2g05624 | 2:30,128,682-30,133,790 | + | C2H2g14178 | CX2g020461 | LOC_Os02g53780 | Os02g0778300 | - | Detail |
| C1H2g30218 | 2:30,134,592-30,137,765 | + | C2H2g03176 | CX2g023034 | LOC_Os02g53790 | Os02g0778400 | - | Detail |
| C1H2g22636 | 2:30,139,972-30,143,925 | + | C2H2g08933 | CX2g023710 | LOC_Os02g53810 | Os02g0778500 | - | Detail |
| C1H2g26979 | 2:30,144,673-30,146,458 | + | C2H2g16347 | CX2g020913 | LOC_Os02g53820 | Os02g0778600 | - | Detail |
| C1H2g20759 | 2:30,148,868-30,151,435 | + | C2H2g05546 | CX2g021136 | LOC_Os02g53830 | Os02g0778700 | - | Detail |
| C1H2g14909 | 2:30,158,231-30,159,850 | + | C2H2g27242 | CX2g019392 | LOC_Os02g53850 | Os02g0779000 | - | Detail |
| C1H2g16389 | 2:30,162,735-30,165,077 | - | C2H2g13528 | CX2g024877 | LOC_Os02g53860 | Os02g0779200 | - | Detail |
| C1H2g10460 | 2:30,196,768-30,199,119 | - | C2H2g27242 | CX2g019392 | LOC_Os02g53970 | Os02g0780200 | - | Detail |
| C1H2g22801 | 2:30,208,106-30,217,288 | + | C2H2g04949 | CX2g019056 | LOC_Os02g53990 | Os02g0780500 | - | Detail |
| C1H2g24524 | 2:30,218,724-30,222,823 | + | C2H2g19319 | CX2g024698 | LOC_Os02g53994 | Os02g0780550 | - | Detail |
| C1H2g04563 | 2:30,227,743-30,229,975 | + | C2H2g26635 | - | LOC_Os02g54000 | Os02g0780600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g19266 | 1:31,509,696-31,513,272 | - | C1H1g00383 | CX1g001311 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| C2H1g14897 | 1:31,519,060-31,524,680 | + | C1H1g00574 | CX1g004790 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| C2H1g11131 | 1:31,539,536-31,545,198 | + | C1H1g31694 | CX1g000601 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| C2H1g22191 | 1:31,557,505-31,562,700 | + | C1H1g07002 | CX1g006439 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| C2H1g03571 | 1:31,563,054-31,565,051 | + | C1H1g10107 | CX1g006609 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| C2H1g17085 | 1:31,565,343-31,568,129 | - | C1H1g13635 | CX1g003404 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| C2H1g00983 | 1:31,572,935-31,573,270 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833150 | - | Detail |
| C2H1g27052 | 1:31,573,508-31,576,185 | + | C1H1g07003 | CX1g003333 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| C2H1g24837 | 1:31,577,218-31,577,884 | + | C1H1g07552 | CX1g005332 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| C2H1g22767 | 1:31,578,637-31,582,534 | - | C1H1g26345 | CX1g001176 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| C2H1g05497 | 1:31,583,766-31,584,739 | - | C1H1g02922 | CX1g000140 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| C2H1g26726 | 1:31,585,550-31,592,623 | - | C1H1g09497 | CX1g003313 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| C2H1g11920 | 1:31,594,680-31,598,908 | - | C1H1g22933 | CX1g003450 | LOC_Os01g61720 | Os01g0833800 | - | Detail |
| C2H1g18321 | 1:31,610,325-31,616,645 | + | C1H1g06428 | CX1g005181 | - | Os01g0663400 | - | Detail |
| C2H1g11202 | 1:31,625,734-31,626,432 | + | C1H1g08789 | - | LOC_Os01g61750 | - | - | Detail |
| C2H1g03973 | 1:31,626,307-31,630,738 | - | C1H1g12416 | CX1g000146 | LOC_Os01g61760 | Os01g0834100 | - | Detail |
| C2H1g25411 | 1:31,635,422-31,646,181 | + | C1H1g06212 | CX1g002696 | LOC_Os01g61780 | Os01g0834200 | - | Detail |
| C2H1g04378 | 1:31,652,315-31,654,763 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g11057 | 1:31,654,816-31,655,016 | - | C1H1g30061 | CX1g000392 | LOC_Os01g61810 | Os01g0834400 | HAP3A, OsHAP3A, OsNF-YB-2, NFYB2 | Detail |
| C2H1g10042 | 1:31,660,441-31,661,642 | - | C1H1g07712 | CX1g001710 | LOC_Os01g61814 | Os01g0834500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |