| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04414 | 1:11,130,938-11,132,486 | + | C2H1g11900 | - | - | - | - | Detail |
| C1H1g24035 | 1:11,134,390-11,135,292 | - | C2H1g09100 | CX1g001954 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| C1H1g22940 | 1:11,156,748-11,159,323 | + | C2H1g05958 | CX1g001596 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| C1H1g12319 | 1:11,159,676-11,165,731 | - | C2H1g26866 | CX1g000240 | LOC_Os01g22600 | Os01g0329400 | - | Detail |
| C1H1g03998 | 1:11,171,500-11,177,206 | + | C2H1g27428 | CX1g004633 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| C1H1g30338 | 1:11,181,068-11,181,580 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g12639 | 1:11,182,471-11,184,477 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g19397 | 1:11,198,061-11,201,521 | + | C2H1g06794 | CX1g007268 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| C1H1g03743 | 1:11,201,584-11,203,108 | - | C2H1g22823 | CX1g006180 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| C1H1g15782 | 1:11,206,647-11,207,843 | + | C2H1g15539 | CX1g005713 | LOC_Os01g22680 | Os01g0347500 | - | Detail |
| C1H1g14705 | 1:11,239,365-11,239,742 | + | C2H1g24217 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g09878 | 1:11,243,065-11,244,522 | + | C2H1g06111 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g18229 | 1:11,254,481-11,258,659 | + | C2H1g00150 | CX1g001443 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| C1H1g29292 | 1:11,270,176-11,274,225 | + | C2H1g27905 | CX1g005311 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| C1H1g15812 | 1:11,275,564-11,277,738 | - | C2H1g02015 | CX1g005606 | LOC_Os01g22910 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g31043 | 1:11,283,396-11,284,474 | - | C2H1g12678 | CX1g005606 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g25028 | 1:11,295,061-11,297,671 | + | C2H1g25435 | CX1g006261 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g00421 | 1:11,307,290-11,308,319 | + | C2H1g11384 | CX1g005436 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g09638 | 1:11,308,851-11,312,333 | - | C2H1g19970 | CX1g005436 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| C1H1g01670 | 1:11,315,158-11,318,039 | - | C2H1g05656 | CX1g002203 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g27784 | 4:4,265,490-4,270,161 | + | C1H4g06403 | CX4g031382 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C2H4g16323 | 4:4,310,620-4,311,495 | - | C1H4g22795 | CX4g034531 | LOC_Os09g03190 | Os09g0120033 | - | Detail |
| C2H4g08316 | 4:4,319,605-4,320,129 | - | C1H4g22795 | CX4g031393 | - | - | - | Detail |
| C2H4g22590 | 4:4,337,572-4,340,092 | - | C1H4g23989 | CX4g034441 | LOC_Os04g08828 | Os04g0171800 | - | Detail |
| C2H4g26043 | 4:4,356,141-4,358,053 | - | C1H4g13047 | CX4g033229 | LOC_Os04g09430 | Os04g0171800 | - | Detail |
| C2H4g09296 | 4:4,361,734-4,363,000 | - | C1H4g12448 | CX4g035209 | LOC_Os04g09520 | Os04g0462200 | - | Detail |
| C2H4g30137 | 4:4,376,394-4,376,702 | - | - | - | - | - | - | Detail |
| C2H4g18023 | 4:4,385,699-4,390,720 | - | C1H4g15809 | CX4g033765 | LOC_Os04g09530 | Os04g0174800 | - | Detail |
| C2H4g07222 | 4:4,401,854-4,404,889 | + | C1H4g04587 | CX4g031895 | LOC_Os04g09540 | Os04g0174900 | - | Detail |
| C2H4g13106 | 4:4,425,822-4,427,132 | - | C1H4g04828 | CX4g034555 | LOC_Os04g09590 | Os04g0175500 | - | Detail |
| C2H4g19878 | 4:4,436,010-4,438,861 | + | C1H4g25500 | CX4g033442 | LOC_Os04g09604 | Os04g0175600 | - | Detail |
| C2H4g01777 | 4:4,461,196-4,464,807 | + | C1H4g27776 | CX4g036641 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C2H4g17556 | 4:4,464,957-4,466,942 | + | C1H4g27776 | CX4g032305 | LOC_Os12g30444 | - | - | Detail |
| C2H4g23631 | 4:4,465,445-4,465,862 | - | - | - | - | - | - | Detail |
| C2H4g06147 | 4:4,473,071-4,473,958 | + | C1H4g04322 | CX4g031947 | LOC_Os04g09654 | Os04g0175900 | - | Detail |
| C2H4g04542 | 4:4,477,617-4,482,183 | - | C1H4g25500 | CX4g031947 | LOC_Os04g09670 | Os04g0176200 | - | Detail |
| C2H4g19699 | 4:4,497,823-4,503,279 | - | C1H4g00886 | CX4g031672 | LOC_Os04g09720 | Os04g0176400 | - | Detail |
| C2H4g05769 | 4:4,555,087-4,555,782 | - | C1H4g18497 | CX4g032484 | LOC_Os04g09780 | Os04g0177100 | - | Detail |
| C2H4g27475 | 4:4,562,393-4,568,186 | - | C1H4g30399 | CX4g034078 | LOC_Os04g09800 | Os04g0177300 | OsCHR735, CHR735 | Detail |
| C2H4g20561 | 4:4,570,947-4,572,941 | - | C1H4g22479 | CX4g034820 | LOC_Os04g09810 | Os04g0177400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |