| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04414 | 1:11,130,938-11,132,486 | + | C2H1g11900 | - | - | - | - | Detail |
| C1H1g24035 | 1:11,134,390-11,135,292 | - | C2H1g09100 | CX1g001954 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| C1H1g22940 | 1:11,156,748-11,159,323 | + | C2H1g05958 | CX1g001596 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| C1H1g12319 | 1:11,159,676-11,165,731 | - | C2H1g26866 | CX1g000240 | LOC_Os01g22600 | Os01g0329400 | - | Detail |
| C1H1g03998 | 1:11,171,500-11,177,206 | + | C2H1g27428 | CX1g004633 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| C1H1g30338 | 1:11,181,068-11,181,580 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g12639 | 1:11,182,471-11,184,477 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g19397 | 1:11,198,061-11,201,521 | + | C2H1g06794 | CX1g007268 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| C1H1g03743 | 1:11,201,584-11,203,108 | - | C2H1g22823 | CX1g006180 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| C1H1g15782 | 1:11,206,647-11,207,843 | + | C2H1g15539 | CX1g005713 | LOC_Os01g22680 | Os01g0347500 | - | Detail |
| C1H1g14705 | 1:11,239,365-11,239,742 | + | C2H1g24217 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g09878 | 1:11,243,065-11,244,522 | + | C2H1g06111 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g18229 | 1:11,254,481-11,258,659 | + | C2H1g00150 | CX1g001443 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| C1H1g29292 | 1:11,270,176-11,274,225 | + | C2H1g27905 | CX1g005311 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| C1H1g15812 | 1:11,275,564-11,277,738 | - | C2H1g02015 | CX1g005606 | LOC_Os01g22910 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g31043 | 1:11,283,396-11,284,474 | - | C2H1g12678 | CX1g005606 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g25028 | 1:11,295,061-11,297,671 | + | C2H1g25435 | CX1g006261 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g00421 | 1:11,307,290-11,308,319 | + | C2H1g11384 | CX1g005436 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g09638 | 1:11,308,851-11,312,333 | - | C2H1g19970 | CX1g005436 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| C1H1g01670 | 1:11,315,158-11,318,039 | - | C2H1g05656 | CX1g002203 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g20622 | 2:28,393,493-28,394,206 | + | - | - | - | - | - | Detail |
| C2H2g24045 | 2:28,398,786-28,400,066 | + | C1H2g10719 | CX2g019676 | LOC_Os02g50740 | Os02g0740900 | - | Detail |
| C2H2g20295 | 2:28,402,691-28,406,400 | + | C1H2g20437 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C2H2g15348 | 2:28,408,000-28,409,280 | + | C1H2g19755 | CX2g019362 | LOC_Os02g50770 | Os02g0741200 | - | Detail |
| C2H2g20379 | 2:28,411,430-28,416,254 | + | C1H2g04090 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C2H2g26992 | 2:28,416,726-28,441,598 | - | C1H2g03541 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| C2H2g19262 | 2:28,445,324-28,446,582 | - | C1H2g24228 | CX2g020349 | LOC_Os02g50810 | Os02g0741700 | - | Detail |
| C2H2g17447 | 2:28,453,359-28,459,040 | - | C1H2g00929 | CX2g020325 | LOC_Os02g50820 | Os02g0741800 | - | Detail |
| C2H2g23000 | 2:28,461,770-28,465,935 | - | C1H2g07670 | CX2g020330 | LOC_Os02g50830 | Os02g0741900 | - | Detail |
| C2H2g04510 | 2:28,468,713-28,475,939 | + | C1H2g09428 | CX2g024454 | LOC_Os02g50840 | Os02g0742000 | - | Detail |
| C2H2g05271 | 2:28,480,866-28,488,123 | + | C1H2g30208 | CX2g022406 | LOC_Os02g50850 | Os02g0742100 | - | Detail |
| C2H2g03132 | 2:28,488,881-28,492,529 | - | C1H2g09499 | CX2g022780 | LOC_Os02g50860 | Os02g0742200 | - | Detail |
| C2H2g30575 | 2:28,503,140-28,503,778 | + | - | - | - | - | - | Detail |
| C2H2g26581 | 2:28,503,874-28,508,024 | - | C1H2g30786 | CX2g022158 | LOC_Os02g50880 | Os02g0742500 | - | Detail |
| C2H2g27845 | 2:28,518,374-28,520,904 | + | C1H2g10416 | CX2g019943 | LOC_Os02g50900 | Os02g0742700 | - | Detail |
| C2H2g13391 | 2:28,528,045-28,536,569 | - | C1H2g03421 | CX2g023679 | LOC_Os02g50910 | Os02g0742900 | - | Detail |
| C2H2g14912 | 2:28,539,227-28,542,228 | - | - | CX2g020446 | LOC_Os03g37780 | Os03g0574300 | - | Detail |
| C2H2g18301 | 2:28,546,358-28,547,548 | + | C1H2g26730 | CX2g022235 | LOC_Os02g50930 | Os02g0743100 | OsBIRF1 | Detail |
| C2H2g30022 | 2:28,550,889-28,551,395 | - | C1H6g24258 | CX2g021784 | LOC_Os02g50940 | Os02g0743200 | - | Detail |
| C2H2g19696 | 2:28,564,063-28,567,187 | - | C1H2g16987 | CX2g020591 | LOC_Os02g50960 | Os02g0743400 | OsPIN1b, REH1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |