| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04414 | 1:11,130,938-11,132,486 | + | C2H1g11900 | - | - | - | - | Detail |
| C1H1g24035 | 1:11,134,390-11,135,292 | - | C2H1g09100 | CX1g001954 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| C1H1g22940 | 1:11,156,748-11,159,323 | + | C2H1g05958 | CX1g001596 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| C1H1g12319 | 1:11,159,676-11,165,731 | - | C2H1g26866 | CX1g000240 | LOC_Os01g22600 | Os01g0329400 | - | Detail |
| C1H1g03998 | 1:11,171,500-11,177,206 | + | C2H1g27428 | CX1g004633 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| C1H1g30338 | 1:11,181,068-11,181,580 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g12639 | 1:11,182,471-11,184,477 | + | C2H1g01944 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C1H1g19397 | 1:11,198,061-11,201,521 | + | C2H1g06794 | CX1g007268 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| C1H1g03743 | 1:11,201,584-11,203,108 | - | C2H1g22823 | CX1g006180 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| C1H1g15782 | 1:11,206,647-11,207,843 | + | C2H1g15539 | CX1g005713 | LOC_Os01g22680 | Os01g0347500 | - | Detail |
| C1H1g14705 | 1:11,239,365-11,239,742 | + | C2H1g24217 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g09878 | 1:11,243,065-11,244,522 | + | C2H1g06111 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C1H1g18229 | 1:11,254,481-11,258,659 | + | C2H1g00150 | CX1g001443 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| C1H1g29292 | 1:11,270,176-11,274,225 | + | C2H1g27905 | CX1g005311 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| C1H1g15812 | 1:11,275,564-11,277,738 | - | C2H1g02015 | CX1g005606 | LOC_Os01g22910 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g31043 | 1:11,283,396-11,284,474 | - | C2H1g12678 | CX1g005606 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C1H1g25028 | 1:11,295,061-11,297,671 | + | C2H1g25435 | CX1g006261 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g00421 | 1:11,307,290-11,308,319 | + | C2H1g11384 | CX1g005436 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C1H1g09638 | 1:11,308,851-11,312,333 | - | C2H1g19970 | CX1g005436 | LOC_Os01g22980 | Os01g0332800 | - | Detail |
| C1H1g01670 | 1:11,315,158-11,318,039 | - | C2H1g05656 | CX1g002203 | LOC_Os01g22990 | Os01g0332900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24841 | 2:4,466,333-4,473,590 | + | C1H2g06273 | - | - | - | - | Detail |
| C2H2g02506 | 2:4,467,459-4,475,507 | - | C1H2g06467 | CX2g022600 | LOC_Os02g09720 | Os02g0189800 | - | Detail |
| C2H2g14951 | 2:4,478,174-4,480,674 | - | C1H2g01542 | - | - | - | - | Detail |
| C2H2g30372 | 2:4,496,908-4,505,951 | + | C1H2g30083 | - | - | Os02g0189900 | - | Detail |
| C2H2g18329 | 2:4,499,651-4,501,987 | - | C1H2g16474 | CX2g021632 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C2H2g16945 | 2:4,505,076-4,507,325 | - | C1H2g04187 | CX2g021192 | LOC_Os02g09720 | Os02g0190000 | - | Detail |
| C2H2g22278 | 2:4,513,353-4,514,216 | + | C1H2g07631 | - | LOC_Os02g09710 | Os02g0190100 | - | Detail |
| C2H2g08799 | 2:4,514,878-4,515,210 | - | C1H2g15671 | CX2g022648 | - | - | - | Detail |
| C2H2g23933 | 2:4,518,660-4,528,120 | - | C1H2g04187 | CX2g021192 | LOC_Os02g09720 | Os02g0190300 | - | Detail |
| C2H2g06769 | 2:4,552,603-4,558,573 | + | C1H2g21943 | CX2g022054 | LOC_Os02g09740 | Os02g0190500 | - | Detail |
| C2H2g16178 | 2:4,564,198-4,564,776 | - | C1H2g15779 | CX2g023142 | LOC_Os02g09760 | Os02g0190700 | - | Detail |
| C2H2g05420 | 2:4,572,781-4,576,587 | - | C1H2g04808 | CX2g021348 | LOC_Os02g09770 | Os02g0190800 | - | Detail |
| C2H2g18343 | 2:4,578,985-4,580,410 | - | C1H2g13385 | CX2g020459 | LOC_Os02g09780 | Os02g0190900 | - | Detail |
| C2H2g21825 | 2:4,600,410-4,600,900 | - | - | - | - | Os02g0191250 | - | Detail |
| C2H2g19527 | 2:4,605,121-4,608,898 | - | C1H2g16598 | CX2g019369 | LOC_Os02g09810 | Os02g0191300 | OsATL6 | Detail |
| C2H2g07551 | 2:4,611,094-4,613,404 | + | C1H2g02472 | CX2g021648 | LOC_Os02g09820 | Os02g0191500 | - | Detail |
| C2H2g25953 | 2:4,619,166-4,622,606 | - | C1H2g12750 | CX2g024871 | LOC_Os02g09840 | Os02g0191700 | - | Detail |
| C2H2g20717 | 2:4,671,796-4,674,961 | - | C1H2g08390 | CX2g018975 | LOC_Os02g09890 | Os02g0192100 | - | Detail |
| C2H2g09261 | 2:4,674,811-4,680,161 | + | C1H2g01762 | - | - | - | - | Detail |
| C2H2g06391 | 2:4,689,950-4,701,925 | + | C1H2g02906 | CX2g023082 | LOC_Os02g09920 | Os02g0192400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |