| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g22451 | 2:29,607,384-29,610,363 | + | C2H2g21002 | CX2g022546 | LOC_Os02g52940 | Os02g0768600 | OsPPa6 | Detail |
| C1H2g22170 | 2:29,617,317-29,629,019 | + | C2H2g14167 | CX2g021081 | LOC_Os02g52960 | Os02g0768800 | - | Detail |
| C1H2g01556 | 2:29,647,291-29,650,461 | - | C2H2g22383 | CX2g022388 | LOC_Os02g53000 | Os02g0769200 | - | Detail |
| C1H2g05767 | 2:29,671,528-29,673,667 | + | C2H2g24589 | CX2g024725 | LOC_Os02g53030 | Os02g0769700 | - | Detail |
| C1H2g05736 | 2:29,674,170-29,678,961 | + | C2H2g21688 | CX2g024725 | LOC_Os02g53040 | Os02g0769800 | - | Detail |
| C1H2g11083 | 2:29,677,237-29,678,280 | - | C2H2g29163 | - | - | - | - | Detail |
| C1H2g17305 | 2:29,679,420-29,680,904 | - | C2H2g13140 | CX2g024823 | LOC_Os02g53050 | Os02g0769900 | - | Detail |
| C1H2g04464 | 2:29,681,501-29,685,401 | - | C2H2g15499 | CX2g020922 | LOC_Os02g53060 | Os02g0770000 | - | Detail |
| C1H2g27490 | 2:29,687,075-29,689,482 | - | C2H2g02912 | CX2g024835 | LOC_Os02g53070 | Os02g0770100 | OsCPR5.2 | Detail |
| C1H2g24571 | 2:29,702,134-29,703,470 | + | - | - | - | Os12g0267064 | - | Detail |
| C1H2g19553 | 2:29,706,725-29,709,438 | + | C2H2g00012 | CX2g024218 | LOC_Os02g53100 | Os02g0770500 | - | Detail |
| C1H2g21424 | 2:29,716,739-29,727,032 | - | C2H2g24714 | CX2g018960 | LOC_Os02g53120 | Os02g0770700 | - | Detail |
| C1H2g18310 | 2:29,735,477-29,738,885 | - | C2H2g26172 | CX2g023674 | LOC_Os02g53130 | Os02g0770800 | OsNR2 | Detail |
| C1H2g12369 | 2:29,745,478-29,750,388 | - | C2H2g22279 | CX2g022775 | LOC_Os02g53140 | Os02g0771100 | - | Detail |
| C1H2g23321 | 2:29,759,939-29,764,013 | - | C2H2g07592 | CX2g022905 | LOC_Os02g53160 | Os02g0771400 | - | Detail |
| C1H2g22568 | 2:29,784,940-29,787,269 | + | C2H2g20257 | CX2g021916 | LOC_Os02g53180 | Os02g0771600 | ACO3, OsACO3 | Detail |
| C1H2g24159 | 2:29,788,330-29,791,474 | - | C2H2g29895 | CX2g021006 | LOC_Os02g53200 | Os02g0771700 | - | Detail |
| C1H2g16264 | 2:29,796,397-29,801,762 | - | C2H2g04485 | CX2g024777 | LOC_Os02g53210 | Os02g0771800 | - | Detail |
| C1H2g02348 | 2:29,807,640-29,807,987 | + | C2H2g15824 | CX2g022902 | LOC_Os02g53230 | Os02g0772000 | OsSPT5-2 | Detail |
| C1H2g11022 | 2:29,817,243-29,818,387 | + | C2H2g18526 | CX2g022902 | LOC_Os02g53230 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00833 | 3:6,156,874-6,159,740 | - | C1H3g13331 | CX3g027611 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| C2H3g09594 | 3:6,162,907-6,164,923 | - | C1H3g17846 | CX3g030152 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| C2H3g04826 | 3:6,169,883-6,171,313 | - | C1H3g04613 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C2H3g04774 | 3:6,176,440-6,180,711 | - | C1H3g30000 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C2H3g26123 | 3:6,213,044-6,213,472 | + | C1H3g07150 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C2H3g04799 | 3:6,217,496-6,217,914 | - | C1H3g22613 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C2H3g26449 | 3:6,218,204-6,220,951 | + | C1H3g28102 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C2H3g15250 | 3:6,226,447-6,227,826 | - | C1H3g02271 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C2H3g13166 | 3:6,242,290-6,244,009 | - | C1H3g01497 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C2H3g05297 | 3:6,245,343-6,249,107 | - | C1H3g06697 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C2H3g03038 | 3:6,259,189-6,260,716 | + | C1H3g26874 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C2H3g18690 | 3:6,262,896-6,263,675 | - | C1H3g16800 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C2H3g14812 | 3:6,265,248-6,268,840 | - | C1H3g06079 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C2H3g23005 | 3:6,272,046-6,275,587 | + | C1H3g06632 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C2H3g09799 | 3:6,279,462-6,283,564 | + | C1H3g16553 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C2H3g00329 | 3:6,284,070-6,297,053 | - | - | - | - | - | - | Detail |
| C2H3g17247 | 3:6,299,016-6,299,858 | - | C1H3g27731 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C2H3g15076 | 3:6,302,555-6,307,791 | + | - | CX3g028989 | LOC_Os03g21310 | - | - | Detail |
| C2H3g00667 | 3:6,318,526-6,319,400 | + | C1H3g19664 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C2H3g02090 | 3:6,321,649-6,322,638 | + | C1H3g02151 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |