| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g22451 | 2:29,607,384-29,610,363 | + | C2H2g21002 | CX2g022546 | LOC_Os02g52940 | Os02g0768600 | OsPPa6 | Detail |
| C1H2g22170 | 2:29,617,317-29,629,019 | + | C2H2g14167 | CX2g021081 | LOC_Os02g52960 | Os02g0768800 | - | Detail |
| C1H2g01556 | 2:29,647,291-29,650,461 | - | C2H2g22383 | CX2g022388 | LOC_Os02g53000 | Os02g0769200 | - | Detail |
| C1H2g05767 | 2:29,671,528-29,673,667 | + | C2H2g24589 | CX2g024725 | LOC_Os02g53030 | Os02g0769700 | - | Detail |
| C1H2g05736 | 2:29,674,170-29,678,961 | + | C2H2g21688 | CX2g024725 | LOC_Os02g53040 | Os02g0769800 | - | Detail |
| C1H2g11083 | 2:29,677,237-29,678,280 | - | C2H2g29163 | - | - | - | - | Detail |
| C1H2g17305 | 2:29,679,420-29,680,904 | - | C2H2g13140 | CX2g024823 | LOC_Os02g53050 | Os02g0769900 | - | Detail |
| C1H2g04464 | 2:29,681,501-29,685,401 | - | C2H2g15499 | CX2g020922 | LOC_Os02g53060 | Os02g0770000 | - | Detail |
| C1H2g27490 | 2:29,687,075-29,689,482 | - | C2H2g02912 | CX2g024835 | LOC_Os02g53070 | Os02g0770100 | OsCPR5.2 | Detail |
| C1H2g24571 | 2:29,702,134-29,703,470 | + | - | - | - | Os12g0267064 | - | Detail |
| C1H2g19553 | 2:29,706,725-29,709,438 | + | C2H2g00012 | CX2g024218 | LOC_Os02g53100 | Os02g0770500 | - | Detail |
| C1H2g21424 | 2:29,716,739-29,727,032 | - | C2H2g24714 | CX2g018960 | LOC_Os02g53120 | Os02g0770700 | - | Detail |
| C1H2g18310 | 2:29,735,477-29,738,885 | - | C2H2g26172 | CX2g023674 | LOC_Os02g53130 | Os02g0770800 | OsNR2 | Detail |
| C1H2g12369 | 2:29,745,478-29,750,388 | - | C2H2g22279 | CX2g022775 | LOC_Os02g53140 | Os02g0771100 | - | Detail |
| C1H2g23321 | 2:29,759,939-29,764,013 | - | C2H2g07592 | CX2g022905 | LOC_Os02g53160 | Os02g0771400 | - | Detail |
| C1H2g22568 | 2:29,784,940-29,787,269 | + | C2H2g20257 | CX2g021916 | LOC_Os02g53180 | Os02g0771600 | ACO3, OsACO3 | Detail |
| C1H2g24159 | 2:29,788,330-29,791,474 | - | C2H2g29895 | CX2g021006 | LOC_Os02g53200 | Os02g0771700 | - | Detail |
| C1H2g16264 | 2:29,796,397-29,801,762 | - | C2H2g04485 | CX2g024777 | LOC_Os02g53210 | Os02g0771800 | - | Detail |
| C1H2g02348 | 2:29,807,640-29,807,987 | + | C2H2g15824 | CX2g022902 | LOC_Os02g53230 | Os02g0772000 | OsSPT5-2 | Detail |
| C1H2g11022 | 2:29,817,243-29,818,387 | + | C2H2g18526 | CX2g022902 | LOC_Os02g53230 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g22870 | 1:4,587,065-4,587,664 | - | C1H1g28329 | CX1g000104 | LOC_Os01g10010 | Os01g0196500 | - | Detail |
| C2H1g12871 | 1:4,589,682-4,591,118 | + | C1H1g05499 | CX1g005979 | LOC_Os01g10020 | Os01g0196600 | - | Detail |
| C2H1g28373 | 1:4,605,875-4,613,282 | + | C1H1g14618 | CX1g004524 | LOC_Os01g10040 | Os01g0197100 | D2, D2b, CYP90D2/D2, d2, dwf2, CYP90D2, D2/CYP90D2, OsD2 | Detail |
| C2H1g18174 | 1:4,615,122-4,620,409 | - | C1H1g20387 | CX1g005780 | LOC_Os01g10050 | Os01g0197200 | - | Detail |
| C2H1g08298 | 1:4,623,015-4,623,565 | + | - | CX1g005103 | LOC_Os01g10070 | Os01g0197350 | - | Detail |
| C2H1g17197 | 1:4,624,739-4,627,138 | + | C1H1g24747 | CX1g005121 | LOC_Os01g10080 | Os01g0197400 | - | Detail |
| C2H1g01272 | 1:4,627,592-4,629,505 | - | C1H1g01968 | CX1g004435 | LOC_Os01g10090 | Os01g0197450 | - | Detail |
| C2H1g12602 | 1:4,630,262-4,632,510 | - | C1H1g23699 | CX1g002532 | LOC_Os01g10100 | Os01g0197500 | - | Detail |
| C2H1g29964 | 1:4,638,301-4,642,740 | - | C1H1g02388 | CX1g000181 | LOC_Os01g10110 | Os01g0197700 | Gn1a, OsCKX2 | Detail |
| C2H1g10405 | 1:4,651,798-4,653,068 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10130 | Os01g0197900 | OsRDR3 | Detail |
| C2H1g14250 | 1:4,653,235-4,665,018 | - | C1H1g16458 | CX1g006534 | - | Os01g0197900 | OsRDR3 | Detail |
| C2H1g22382 | 1:4,665,514-4,666,916 | - | C1H1g16458 | CX1g006534 | - | Os01g0197900 | OsRDR3 | Detail |
| C2H1g06287 | 1:4,668,151-4,669,334 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C2H1g09190 | 1:4,669,519-4,679,023 | - | C1H1g16458 | CX1g006534 | LOC_Os01g10140 | Os01g0198000 | OsRDR4 | Detail |
| C2H1g16198 | 1:4,679,850-4,683,835 | - | C1H1g16458 | CX1g006534 | - | Os01g0198000 | OsRDR4 | Detail |
| C2H1g26620 | 1:4,688,816-4,695,355 | - | C1H1g16973 | CX1g001693 | LOC_Os01g10150 | Os01g0198200 | - | Detail |
| C2H1g23718 | 1:4,705,402-4,706,118 | - | C1H1g29548 | CX1g002926 | LOC_Os01g10180 | Os01g0198500 | - | Detail |
| C2H1g20955 | 1:4,726,171-4,726,818 | + | - | CX1g000304 | LOC_Os01g10210 | Os01g0198900 | - | Detail |
| C2H1g09712 | 1:4,734,659-4,735,255 | + | - | CX1g000572 | LOC_Os01g10230 | Os01g0199300 | - | Detail |
| C2H1g26709 | 1:4,738,822-4,743,043 | - | C1H1g25179 | CX1g006691 | LOC_Os01g10250 | Os01g0199400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |