| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g22451 | 2:29,607,384-29,610,363 | + | C2H2g21002 | CX2g022546 | LOC_Os02g52940 | Os02g0768600 | OsPPa6 | Detail |
| C1H2g22170 | 2:29,617,317-29,629,019 | + | C2H2g14167 | CX2g021081 | LOC_Os02g52960 | Os02g0768800 | - | Detail |
| C1H2g01556 | 2:29,647,291-29,650,461 | - | C2H2g22383 | CX2g022388 | LOC_Os02g53000 | Os02g0769200 | - | Detail |
| C1H2g05767 | 2:29,671,528-29,673,667 | + | C2H2g24589 | CX2g024725 | LOC_Os02g53030 | Os02g0769700 | - | Detail |
| C1H2g05736 | 2:29,674,170-29,678,961 | + | C2H2g21688 | CX2g024725 | LOC_Os02g53040 | Os02g0769800 | - | Detail |
| C1H2g11083 | 2:29,677,237-29,678,280 | - | C2H2g29163 | - | - | - | - | Detail |
| C1H2g17305 | 2:29,679,420-29,680,904 | - | C2H2g13140 | CX2g024823 | LOC_Os02g53050 | Os02g0769900 | - | Detail |
| C1H2g04464 | 2:29,681,501-29,685,401 | - | C2H2g15499 | CX2g020922 | LOC_Os02g53060 | Os02g0770000 | - | Detail |
| C1H2g27490 | 2:29,687,075-29,689,482 | - | C2H2g02912 | CX2g024835 | LOC_Os02g53070 | Os02g0770100 | OsCPR5.2 | Detail |
| C1H2g24571 | 2:29,702,134-29,703,470 | + | - | - | - | Os12g0267064 | - | Detail |
| C1H2g19553 | 2:29,706,725-29,709,438 | + | C2H2g00012 | CX2g024218 | LOC_Os02g53100 | Os02g0770500 | - | Detail |
| C1H2g21424 | 2:29,716,739-29,727,032 | - | C2H2g24714 | CX2g018960 | LOC_Os02g53120 | Os02g0770700 | - | Detail |
| C1H2g18310 | 2:29,735,477-29,738,885 | - | C2H2g26172 | CX2g023674 | LOC_Os02g53130 | Os02g0770800 | OsNR2 | Detail |
| C1H2g12369 | 2:29,745,478-29,750,388 | - | C2H2g22279 | CX2g022775 | LOC_Os02g53140 | Os02g0771100 | - | Detail |
| C1H2g23321 | 2:29,759,939-29,764,013 | - | C2H2g07592 | CX2g022905 | LOC_Os02g53160 | Os02g0771400 | - | Detail |
| C1H2g22568 | 2:29,784,940-29,787,269 | + | C2H2g20257 | CX2g021916 | LOC_Os02g53180 | Os02g0771600 | ACO3, OsACO3 | Detail |
| C1H2g24159 | 2:29,788,330-29,791,474 | - | C2H2g29895 | CX2g021006 | LOC_Os02g53200 | Os02g0771700 | - | Detail |
| C1H2g16264 | 2:29,796,397-29,801,762 | - | C2H2g04485 | CX2g024777 | LOC_Os02g53210 | Os02g0771800 | - | Detail |
| C1H2g02348 | 2:29,807,640-29,807,987 | + | C2H2g15824 | CX2g022902 | LOC_Os02g53230 | Os02g0772000 | OsSPT5-2 | Detail |
| C1H2g11022 | 2:29,817,243-29,818,387 | + | C2H2g18526 | CX2g022902 | LOC_Os02g53230 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g05786 | 7:4,212,789-4,215,761 | - | C1H7g00026 | CX7g048929 | LOC_Os07g08750 | Os07g0185000 | - | Detail |
| C2H7g20869 | 7:4,217,714-4,222,053 | - | C1H7g02270 | CX7g050270 | LOC_Os07g08760 | Os07g0185200 | - | Detail |
| C2H7g07159 | 7:4,227,217-4,227,744 | - | - | CX7g046271 | LOC_Os07g08770 | Os07g0185300 | - | Detail |
| C2H7g09570 | 7:4,241,011-4,247,301 | + | C1H7g21233 | CX7g050362 | LOC_Os07g08790 | Os07g0185432 | - | Detail |
| C2H7g02745 | 7:4,255,191-4,262,713 | + | C1H7g04399 | CX7g049699 | LOC_Os07g08810 | Os07g0185700 | - | Detail |
| C2H7g29336 | 7:4,266,820-4,269,949 | + | C1H7g17793 | CX7g048108 | LOC_Os07g08820 | Os07g0185800 | - | Detail |
| C2H7g13139 | 7:4,277,748-4,277,984 | - | C1H7g13541 | CX3g028966 | - | Os07g0185900 | - | Detail |
| C2H7g30045 | 7:4,287,679-4,289,641 | - | C1H7g15110 | CX7g047579 | LOC_Os07g08840 | Os07g0186000 | TRXH, trxh, Trx-H, OsTRXh1, OsTrxh1, Os1, OsTrx23, RPP13-1 | Detail |
| C2H7g25400 | 7:4,304,929-4,307,445 | - | C1H7g16802 | CX7g046706 | LOC_Os07g08860 | Os07g0186200 | SDRLK-SIK2, SIK2, OsSIK2, YK14 | Detail |
| C2H7g00916 | 7:4,311,780-4,314,422 | + | C1H7g31770 | CX7g047241 | LOC_Os07g08880 | Os07g0186400 | OsSHL1 | Detail |
| C2H7g24863 | 7:4,321,609-4,324,329 | + | C1H7g06257 | CX7g047241 | LOC_Os07g08890 | Os07g0186500 | - | Detail |
| C2H7g24828 | 7:4,327,031-4,333,206 | + | C1H7g14544 | CX7g047294 | LOC_Os07g08950 | Os07g0187200 | OsD-LDH2 | Detail |
| C2H7g12614 | 7:4,333,892-4,336,525 | - | C1H7g26846 | CX7g049916 | LOC_Os07g08960 | Os07g0549800 | - | Detail |
| C2H7g29149 | 7:4,337,669-4,341,516 | - | C1H7g27888 | CX7g048853 | LOC_Os07g08970 | Os07g0187400 | - | Detail |
| C2H7g29227 | 7:4,345,945-4,350,142 | + | C1H7g28076 | CX7g047749 | LOC_Os07g09000 | Os07g0187700 | PHF1, OsPHF1, OsWD40-137, OsSEC12 | Detail |
| C2H7g04045 | 7:4,360,372-4,362,273 | + | - | CX7g048678 | LOC_Os07g09010 | Os07g0187900 | - | Detail |
| C2H7g16781 | 7:4,367,052-4,377,051 | - | C1H7g18469 | CX7g050137 | LOC_Os07g09020 | Os07g0188000 | - | Detail |
| C2H7g28352 | 7:4,388,179-4,390,738 | + | C1H7g07933 | CX7g048045 | LOC_Os07g09040 | Os07g0188233 | - | Detail |
| C2H7g22140 | 7:4,392,080-4,393,178 | + | C1H7g27796 | CX7g049512 | LOC_Os07g09040 | Os07g0188266 | - | Detail |
| C2H7g15428 | 7:4,396,177-4,399,976 | + | C1H7g22647 | CX7g048570 | LOC_Os07g09050 | Os07g0188700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |