| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g08973 | 2:29,486,516-29,488,110 | - | C2H2g29404 | CX2g021489 | LOC_Os02g52710 | Os02g0765600 | AMY1A, Amy1A/C*(RAmy1A/C), alpha Amy7, AMY1.1, Amy1A, RAmy1A/C, Amy1A/C*, Amy1, Amy1A_C, OsAmy1A, alphaAmy7-C, RAmy1A | Detail |
| C1H2g26635 | 2:29,491,640-29,492,317 | - | C2H2g24763 | CX2g019501 | LOC_Os02g52720 | Os02g0765800 | - | Detail |
| C1H2g13987 | 2:29,492,995-29,498,859 | - | C2H2g20003 | CX2g022397 | LOC_Os02g52744 | Os02g0766000 | - | Detail |
| C1H2g23770 | 2:29,505,104-29,506,173 | + | C2H2g16702 | CX2g019269 | LOC_Os02g52770 | Os02g0766600 | - | Detail |
| C1H2g16420 | 2:29,508,096-29,513,216 | - | C2H2g14916 | CX2g021391 | LOC_Os02g52780 | Os02g0766700 | BZIP23, OsbZIP23, OsAREB1, OsABF2, Osbzip23, OsAREB2 | Detail |
| C1H2g22906 | 2:29,514,765-29,516,017 | - | C2H2g08910 | CX2g023223 | LOC_Os02g52800 | - | - | Detail |
| C1H2g21062 | 2:29,516,257-29,516,906 | - | C2H2g30296 | CX2g023223 | LOC_Os02g52800 | Os02g0766900 | - | Detail |
| C1H2g20452 | 2:29,517,910-29,525,678 | - | C2H2g10227 | CX2g024302 | LOC_Os02g52810 | Os02g0767000 | - | Detail |
| C1H2g09699 | 2:29,529,136-29,533,815 | + | C2H2g03870 | CX2g022681 | LOC_Os02g52820 | Os02g0767100 | - | Detail |
| C1H2g10695 | 2:29,534,390-29,537,933 | - | C2H2g04249 | CX2g018835 | LOC_Os02g52830 | Os02g0767200 | - | Detail |
| C1H2g17405 | 2:29,546,391-29,546,630 | - | C2H2g14519 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C1H2g09946 | 2:29,546,636-29,547,570 | - | C2H2g14519 | CX2g023288 | LOC_Os02g52840 | Os02g0767300 | OsFLS | Detail |
| C1H2g24330 | 2:29,548,613-29,551,351 | - | C2H2g22142 | CX2g019076 | LOC_Os02g52850 | Os02g0767400 | SDRLK-59 | Detail |
| C1H2g03367 | 2:29,554,780-29,558,698 | - | C2H2g08643 | CX2g023311 | LOC_Os02g52860 | Os02g0767500 | - | Detail |
| C1H2g00086 | 2:29,560,116-29,561,132 | + | C2H2g01609 | CX2g020134 | LOC_Os02g52870 | Os02g0767600 | - | Detail |
| C1H2g22835 | 2:29,561,938-29,565,873 | - | C2H2g28311 | CX2g019177 | LOC_Os02g52880 | Os02g0767700 | - | Detail |
| C1H2g13024 | 2:29,586,012-29,586,637 | + | C2H2g16642 | CX2g020174 | LOC_Os02g52900 | Os02g0767900 | - | Detail |
| C1H2g31571 | 2:29,588,716-29,590,374 | - | C2H2g15864 | CX2g023130 | LOC_Os02g52910 | Os02g0768000 | - | Detail |
| C1H2g24818 | 2:29,591,237-29,593,905 | - | C2H2g21836 | CX2g024813 | LOC_Os02g52920 | Os02g0768200 | - | Detail |
| C1H2g14907 | 2:29,596,790-29,599,243 | - | C2H2g10491 | CX2g021956 | LOC_Os02g52930 | Os02g0768300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26364 | 1:8,318,093-8,320,743 | - | C1H1g26462 | CX1g002307 | LOC_Os01g16320 | Os01g0268700 | - | Detail |
| C2H1g07376 | 1:8,323,076-8,328,089 | + | C1H1g22656 | CX1g005043 | LOC_Os01g16330 | Os01g0268800 | - | Detail |
| C2H1g15881 | 1:8,328,848-8,331,188 | + | C1H1g05590 | CX1g006980 | LOC_Os01g16340 | Os01g0268900 | - | Detail |
| C2H1g26690 | 1:8,332,513-8,342,909 | - | C1H1g03305 | CX1g002921 | LOC_Os01g16350 | Os01g0269100 | - | Detail |
| C2H1g13185 | 1:8,387,526-8,389,181 | + | C1H1g08644 | CX1g003485 | LOC_Os01g16400 | Os01g0269800 | - | Detail |
| C2H1g25069 | 1:8,390,470-8,392,664 | - | C1H1g18111 | CX1g006578 | LOC_Os01g16414 | Os01g0269900 | OsARP6 | Detail |
| C2H1g28351 | 1:8,395,397-8,398,451 | - | C1H1g03213 | CX1g001230 | LOC_Os01g16430 | Os01g0270100 | - | Detail |
| C2H1g10510 | 1:8,407,069-8,408,863 | + | C1H1g30414 | CX1g002719 | LOC_Os01g16450 | Os01g0270300 | - | Detail |
| C2H1g29197 | 1:8,414,121-8,415,842 | + | C1H1g20616 | CX1g003971 | LOC_Os01g16470 | Os01g0270700 | - | Detail |
| C2H1g28459 | 1:8,419,329-8,420,811 | - | C1H3g02865 | - | - | - | - | Detail |
| C2H1g14098 | 1:8,425,325-8,425,888 | + | - | CX1g003624 | - | - | - | Detail |
| C2H1g20605 | 1:8,434,034-8,434,454 | + | C1H3g28943 | - | LOC_Os05g33670 | Os05g0406550 | - | Detail |
| C2H1g23269 | 1:8,436,723-8,439,224 | + | C1H1g12376 | CX1g005256 | LOC_Os01g16510 | Os01g0271000 | - | Detail |
| C2H1g13171 | 1:8,439,582-8,443,835 | - | C1H1g15294 | CX1g001075 | LOC_Os01g16520 | Os01g0271200 | OsGluRS | Detail |
| C2H1g23197 | 1:8,444,788-8,448,786 | - | C1H1g14438 | CX1g002800 | LOC_Os01g16530 | Os01g0271400 | - | Detail |
| C2H1g08814 | 1:8,450,866-8,455,161 | + | C1H1g27124 | CX1g005031 | LOC_Os01g16540 | Os01g0271500 | - | Detail |
| C2H1g05634 | 1:8,461,605-8,463,955 | - | C1H1g12818 | CX1g005496 | LOC_Os01g16550 | Os01g0271700 | - | Detail |
| C2H1g12316 | 1:8,464,620-8,465,200 | - | - | - | - | - | - | Detail |
| C2H1g19077 | 1:8,466,606-8,467,256 | - | C1H1g12280 | - | - | - | - | Detail |
| C2H1g22302 | 1:8,472,268-8,476,395 | + | C1H1g06668 | CX1g001783 | LOC_Os01g16600 | Os01g0272600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |