| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16254 | 2:28,968,825-28,970,596 | + | C2H2g08856 | CX2g024490 | LOC_Os02g51660 | Os02g0752600 | - | Detail |
| C1H2g00963 | 2:28,999,405-29,002,626 | + | C2H2g08284 | CX2g021449 | LOC_Os02g51680 | Os02g0753000 | - | Detail |
| C1H2g18992 | 2:29,009,796-29,011,888 | + | C2H2g25596 | CX2g018924 | LOC_Os02g51700 | Os02g0753200 | - | Detail |
| C1H2g26243 | 2:29,012,717-29,013,366 | + | C2H2g02815 | CX2g018987 | LOC_Os02g51710 | Os02g0753300 | - | Detail |
| C1H2g30879 | 2:29,021,437-29,024,498 | - | C2H2g30533 | CX2g019204 | LOC_Os02g51730 | Os02g0753500 | - | Detail |
| C1H2g24008 | 2:29,032,633-29,034,925 | - | C2H2g21591 | CX2g020004 | LOC_Os02g51750 | Os02g0753800 | ANN2, OsANN2 | Detail |
| C1H2g30887 | 2:29,043,524-29,046,258 | + | C2H2g30548 | CX2g020182 | LOC_Os02g51760 | Os02g0753900 | - | Detail |
| C1H2g24939 | 2:29,046,871-29,050,201 | + | C2H2g08318 | CX2g020194 | LOC_Os02g51770 | Os02g0754000 | - | Detail |
| C1H2g05832 | 2:29,050,934-29,055,297 | - | C2H2g21614 | CX2g024338 | LOC_Os02g51780 | Os02g0754100 | - | Detail |
| C1H2g15781 | 2:29,057,111-29,058,539 | + | C2H2g19225 | CX2g019527 | LOC_Os02g51790 | Os02g0754300 | - | Detail |
| C1H2g31446 | 2:29,061,881-29,063,865 | - | C2H2g08622 | CX2g021972 | LOC_Os02g51799 | Os02g0754400 | Os2R_MYB31 | Detail |
| C1H2g12325 | 2:29,076,841-29,084,709 | + | C2H2g03959 | CX2g020141 | LOC_Os02g51810 | Os02g0754500 | OM64 | Detail |
| C1H2g07702 | 2:29,085,043-29,086,432 | + | C2H2g24256 | CX2g020843 | LOC_Os02g51820 | Os02g0754600 | - | Detail |
| C1H2g01909 | 2:29,086,632-29,091,708 | - | C2H2g22795 | CX2g020955 | LOC_Os02g51830 | Os02g0754700 | - | Detail |
| C1H2g27515 | 2:29,093,263-29,095,457 | + | C2H2g17343 | CX2g019973 | LOC_Os02g51840 | Os02g0754800 | - | Detail |
| C1H2g28331 | 2:29,096,591-29,099,056 | - | C2H2g07883 | CX2g022594 | LOC_Os02g51850 | Os02g0754900 | - | Detail |
| C1H2g20999 | 2:29,106,198-29,107,776 | - | C2H2g17447 | CX2g020325 | LOC_Os02g50820 | Os02g0741800 | - | Detail |
| C1H2g15196 | 2:29,109,364-29,114,747 | - | C2H2g23797 | CX2g022833 | LOC_Os02g51860 | Os02g0755000 | OsTSD2 | Detail |
| C1H2g30118 | 2:29,127,474-29,133,457 | + | C2H2g07992 | CX2g023524 | LOC_Os02g51890 | Os02g0755400 | - | Detail |
| C1H2g05375 | 2:29,134,036-29,135,583 | - | C2H2g18444 | CX2g020690 | LOC_Os02g51900 | Os02g0755500 | UGT85E1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g24172 | 7:24,556,114-24,559,156 | - | - | CX7g047079 | - | - | - | Detail |
| C2H7g19394 | 7:24,559,801-24,561,552 | + | C1H7g14309 | CX3g027341 | LOC_Os07g49250 | Os07g0693100 | - | Detail |
| C2H7g18291 | 7:24,565,826-24,582,082 | + | C1H7g28070 | CX7g048782 | LOC_Os07g49270 | Os07g0693500 | - | Detail |
| C2H7g00587 | 7:24,582,222-24,586,934 | - | C1H7g12596 | CX7g046134 | LOC_Os07g49280 | Os07g0693600 | - | Detail |
| C2H7g28926 | 7:24,588,612-24,591,329 | - | C1H7g23269 | CX7g050224 | LOC_Os07g49290 | Os07g0173300 | qCTB7 | Detail |
| C2H7g26555 | 7:24,591,036-24,600,013 | + | C1H7g28065 | CX7g048290 | LOC_Os07g49300 | Os07g0693700 | - | Detail |
| C2H7g16809 | 7:24,600,670-24,603,092 | + | C1H7g30527 | CX7g046443 | LOC_Os07g49310 | Os07g0693800 | - | Detail |
| C2H7g22468 | 7:24,603,997-24,615,323 | + | C1H7g02758 | CX7g047911 | LOC_Os07g49320 | Os07g0693900 | - | Detail |
| C2H7g03488 | 7:24,615,713-24,618,783 | - | C1H7g23813 | CX7g049802 | LOC_Os07g49330 | Os07g0694000 | - | Detail |
| C2H7g11947 | 7:24,633,546-24,639,198 | - | C1H7g04846 | CX7g048511 | LOC_Os07g49370 | Os07g0694400 | OsIRX9, OsGT43C, OsGT43C/OsIRX9 | Detail |
| C2H7g21515 | 7:24,642,065-24,644,238 | + | C1H7g04330 | CX7g048246 | LOC_Os07g49380 | Os07g0694500 | - | Detail |
| C2H7g10645 | 7:24,645,075-24,648,493 | - | C1H7g06499 | CX7g048998 | LOC_Os07g49390 | Os07g0694600 | PDT | Detail |
| C2H7g29269 | 7:24,650,119-24,652,386 | - | C1H7g10754 | CX7g047831 | LOC_Os07g49400 | Os07g0694700 | APX2, OsAPX2, APXb | Detail |
| C2H7g08373 | 7:24,655,506-24,659,432 | - | C1H7g15269 | CX7g048258 | LOC_Os07g49410 | Os07g0694800 | - | Detail |
| C2H7g00903 | 7:24,667,339-24,679,657 | + | C1H7g06766 | CX7g048455 | LOC_Os07g49460 | Os07g0695100 | - | Detail |
| C2H7g12209 | 7:24,681,424-24,683,990 | + | C1H7g28034 | CX7g048022 | LOC_Os07g49470 | Os07g0695300 | - | Detail |
| C2H7g20370 | 7:24,684,099-24,688,611 | - | C1H7g26360 | CX7g049781 | LOC_Os07g49480 | Os07g0695400 | - | Detail |
| C2H7g29735 | 7:24,691,115-24,693,002 | + | C1H7g08926 | CX7g047215 | LOC_Os07g49510 | Os07g0695700 | - | Detail |
| C2H7g12536 | 7:24,695,021-24,700,738 | + | C1H7g03312 | CX7g046226 | LOC_Os07g49520 | Os07g0695800 | - | Detail |
| C2H7g18867 | 7:24,701,575-24,702,051 | + | C1H7g12414 | CX7g046250 | LOC_Os07g49530 | Os07g0695900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |