| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10005 | 2:28,207,592-28,213,840 | + | C2H2g04852 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| C1H2g07594 | 2:28,214,316-28,214,573 | - | C2H2g22765 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C1H2g14249 | 2:28,227,982-28,228,206 | + | C2H2g21919 | - | LOC_Os02g50450 | Os02g0737950 | - | Detail |
| C1H2g30478 | 2:28,228,722-28,229,055 | + | - | - | - | Os02g0737950 | - | Detail |
| C1H2g00500 | 2:28,261,361-28,267,274 | + | C2H2g16308 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C1H2g09387 | 2:28,276,045-28,279,625 | + | C2H2g12754 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C1H2g28406 | 2:28,287,671-28,297,491 | - | C2H2g25440 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C1H2g30401 | 2:28,297,507-28,297,704 | - | - | CX2g022539 | - | - | - | Detail |
| C1H2g06055 | 2:28,299,126-28,308,398 | + | C2H2g10338 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C1H2g22155 | 2:28,308,325-28,312,785 | - | C2H2g19070 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C1H2g19740 | 2:28,332,807-28,336,612 | - | C2H2g13279 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C1H2g02446 | 2:28,338,313-28,341,142 | - | C2H2g20599 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C1H2g01602 | 2:28,343,991-28,348,147 | - | C2H2g22496 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C1H2g14498 | 2:28,363,242-28,369,337 | - | C2H2g07910 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C1H2g26149 | 2:28,370,112-28,371,544 | - | C2H2g25866 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C1H2g27425 | 2:28,376,019-28,377,561 | + | C2H2g26692 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C1H2g04140 | 2:28,382,759-28,385,516 | - | C2H2g23006 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C1H2g20437 | 2:28,398,757-28,402,464 | + | C2H2g20295 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C1H2g04090 | 2:28,407,528-28,412,353 | + | C2H2g20379 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C1H2g03541 | 2:28,412,827-28,437,570 | - | C2H2g26992 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00123 | 4:19,178,355-19,180,979 | + | C1H4g25812 | CX4g035934 | LOC_Os04g36850 | Os04g0446200 | - | Detail |
| C2H4g15373 | 4:19,181,969-19,184,686 | - | C1H4g22842 | CX4g033038 | LOC_Os04g36859 | Os04g0446300 | - | Detail |
| C2H4g30612 | 4:19,189,670-19,190,170 | - | - | CX4g033684 | - | Os04g0446401 | - | Detail |
| C2H4g05616 | 4:19,191,600-19,194,687 | + | C1H4g15722 | CX4g034836 | LOC_Os04g36890 | Os04g0446500 | - | Detail |
| C2H4g24683 | 4:19,198,811-19,200,884 | - | C1H4g29772 | CX4g032071 | LOC_Os04g36910 | Os04g0675800 | - | Detail |
| C2H4g15235 | 4:19,203,320-19,205,140 | + | C1H4g24047 | CX4g031740 | LOC_Os04g39000 | Os04g0477200 | - | Detail |
| C2H4g17395 | 4:19,236,662-19,240,681 | + | C1H4g31241 | CX4g035903 | LOC_Os04g37430 | Os04g0447100 | SPH | Detail |
| C2H4g08055 | 4:19,243,217-19,245,106 | - | C1H4g28115 | CX4g032826 | LOC_Os04g37460 | Os04g0447400 | - | Detail |
| C2H4g00082 | 4:19,245,570-19,248,136 | + | C1H4g16514 | CX4g036423 | LOC_Os04g37470 | Os04g0447500 | - | Detail |
| C2H4g04455 | 4:19,248,822-19,252,753 | + | C1H4g20692 | CX4g031955 | LOC_Os04g37480 | Os04g0447600 | - | Detail |
| C2H4g06514 | 4:19,253,249-19,255,766 | + | C1H4g16860 | CX4g034192 | LOC_Os04g37490 | Os04g0447700 | - | Detail |
| C2H4g00146 | 4:19,258,110-19,259,502 | + | C1H4g11216 | CX4g036084 | LOC_Os04g37500 | Os04g0447800 | OsGAD2 | Detail |
| C2H4g10663 | 4:19,260,858-19,261,415 | + | C1H4g10412 | CX4g035240 | LOC_Os04g37500 | Os04g0447800 | OsGAD2 | Detail |
| C2H4g00976 | 4:19,261,889-19,262,575 | - | C1H4g03454 | CX4g034935 | LOC_Os04g37510 | Os04g0447900 | - | Detail |
| C2H4g26971 | 4:19,264,193-19,266,282 | + | C1H4g15297 | CX4g032313 | LOC_Os04g37520 | Os04g0448000 | - | Detail |
| C2H4g19497 | 4:19,267,003-19,267,806 | - | C1H4g00662 | CX4g035994 | LOC_Os04g37530 | Os04g0448100 | OsSIDP301 | Detail |
| C2H4g24483 | 4:19,270,510-19,276,287 | + | C1H4g11503 | CX4g034328 | LOC_Os04g37540 | Os04g0448200 | - | Detail |
| C2H4g30010 | 4:19,277,840-19,279,204 | + | C1H4g29726 | CX4g032172 | LOC_Os04g37550 | Os04g0448300 | - | Detail |
| C2H4g25027 | 4:19,286,536-19,291,630 | - | C1H4g03408 | - | - | - | - | Detail |
| C2H4g00741 | 4:19,292,259-19,293,635 | + | C1H4g15301 | CX4g032857 | LOC_Os04g37570 | Os04g0448500 | OsAP37 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |