| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10005 | 2:28,207,592-28,213,840 | + | C2H2g04852 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| C1H2g07594 | 2:28,214,316-28,214,573 | - | C2H2g22765 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C1H2g14249 | 2:28,227,982-28,228,206 | + | C2H2g21919 | - | LOC_Os02g50450 | Os02g0737950 | - | Detail |
| C1H2g30478 | 2:28,228,722-28,229,055 | + | - | - | - | Os02g0737950 | - | Detail |
| C1H2g00500 | 2:28,261,361-28,267,274 | + | C2H2g16308 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C1H2g09387 | 2:28,276,045-28,279,625 | + | C2H2g12754 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C1H2g28406 | 2:28,287,671-28,297,491 | - | C2H2g25440 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C1H2g30401 | 2:28,297,507-28,297,704 | - | - | CX2g022539 | - | - | - | Detail |
| C1H2g06055 | 2:28,299,126-28,308,398 | + | C2H2g10338 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C1H2g22155 | 2:28,308,325-28,312,785 | - | C2H2g19070 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C1H2g19740 | 2:28,332,807-28,336,612 | - | C2H2g13279 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C1H2g02446 | 2:28,338,313-28,341,142 | - | C2H2g20599 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C1H2g01602 | 2:28,343,991-28,348,147 | - | C2H2g22496 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C1H2g14498 | 2:28,363,242-28,369,337 | - | C2H2g07910 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C1H2g26149 | 2:28,370,112-28,371,544 | - | C2H2g25866 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C1H2g27425 | 2:28,376,019-28,377,561 | + | C2H2g26692 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C1H2g04140 | 2:28,382,759-28,385,516 | - | C2H2g23006 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C1H2g20437 | 2:28,398,757-28,402,464 | + | C2H2g20295 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C1H2g04090 | 2:28,407,528-28,412,353 | + | C2H2g20379 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C1H2g03541 | 2:28,412,827-28,437,570 | - | C2H2g26992 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g07976 | 2:15,851,812-15,854,514 | + | C1H2g27611 | CX2g019651 | LOC_Os02g27490 | Os02g0475400 | - | Detail |
| C2H2g06652 | 2:15,935,377-15,940,694 | - | C1H2g06193 | CX2g021099 | LOC_Os02g27680 | Os02g0478300 | - | Detail |
| C2H2g20700 | 2:15,940,693-15,941,101 | + | - | - | LOC_Os09g02390 | - | - | Detail |
| C2H2g03372 | 2:15,980,799-15,987,675 | + | C1H2g16285 | CX2g019568 | LOC_Os02g27620 | Os02g0477700 | D50 | Detail |
| C2H2g29133 | 2:16,008,194-16,013,621 | + | C1H2g05787 | CX2g019048 | LOC_Os02g27740 | Os02g0478500 | - | Detail |
| C2H2g00622 | 2:16,027,559-16,028,170 | + | C1H2g31453 | CX2g021026 | LOC_Os02g27760 | Os02g0478600 | - | Detail |
| C2H2g29643 | 2:16,030,878-16,032,157 | + | C1H2g23077 | CX2g021434 | LOC_Os02g27769 | Os02g0478700 | - | Detail |
| C2H2g08132 | 2:16,055,813-16,058,109 | - | C1H2g27566 | CX2g023314 | LOC_Os02g27810 | Os02g0479300 | - | Detail |
| C2H2g20571 | 2:16,066,583-16,070,902 | + | C1H2g08374 | CX2g023237 | LOC_Os02g27820 | Os02g0480800 | - | Detail |
| C2H2g14883 | 2:16,077,146-16,081,037 | + | C1H2g02192 | CX2g023237 | LOC_Os02g27940 | Os02g0480800 | - | Detail |
| C2H2g01090 | 2:16,083,346-16,091,909 | - | C1H2g03099 | CX2g018838 | LOC_Os02g27950 | Os02g0480900 | - | Detail |
| C2H2g16284 | 2:16,096,850-16,098,907 | - | C1H2g20113 | CX2g024690 | LOC_Os02g27960 | Os02g0481000 | - | Detail |
| C2H2g02051 | 2:16,140,667-16,149,655 | - | C1H2g19483 | CX2g024232 | LOC_Os02g28040 | Os02g0481700 | - | Detail |
| C2H2g01590 | 2:16,154,782-16,164,693 | + | C1H2g16509 | CX2g023813 | LOC_Os02g28074 | Os02g0481900 | OsXrn4-L | Detail |
| C2H2g18669 | 2:16,189,961-16,190,922 | - | C1H2g25526 | CX2g024525 | LOC_Os02g28170 | Os02g0483500 | - | Detail |
| C2H2g29077 | 2:16,221,489-16,222,941 | - | C1H2g01888 | CX2g024525 | LOC_Os02g28170 | Os02g0483500 | - | Detail |
| C2H2g02782 | 2:16,228,444-16,229,398 | - | - | - | - | - | - | Detail |
| C2H2g14927 | 2:16,237,864-16,239,251 | - | C1H2g26062 | CX2g024525 | LOC_Os02g28200 | Os02g0483800 | - | Detail |
| C2H2g12358 | 2:16,293,526-16,297,061 | + | C1H2g17511 | CX2g024017 | LOC_Os02g28340 | Os02g0485000 | - | Detail |
| C2H2g02644 | 2:16,367,824-16,368,837 | + | C1H2g22601 | CX2g020796 | LOC_Os02g28450 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |