| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05277 | 2:28,040,330-28,040,981 | - | C2H2g23239 | CX2g024096 | LOC_Os02g50050 | Os02g0733400 | - | Detail |
| C1H2g25545 | 2:28,048,837-28,051,565 | + | C2H2g29637 | CX2g024530 | LOC_Os02g50100 | Os02g0733800 | - | Detail |
| C1H2g09486 | 2:28,070,190-28,070,921 | + | C2H2g14181 | CX2g019678 | LOC_Os02g50130 | Os02g0734300 | - | Detail |
| C1H2g30933 | 2:28,083,037-28,084,380 | + | C2H2g24179 | - | LOC_Os02g50140 | Os02g0734400 | - | Detail |
| C1H2g20322 | 2:28,087,820-28,090,232 | + | C2H2g24179 | - | LOC_Os02g50150 | Os02g0734500 | - | Detail |
| C1H2g10371 | 2:28,092,270-28,092,723 | + | C2H2g06034 | - | LOC_Os02g50174 | Os02g0734600 | - | Detail |
| C1H2g11288 | 2:28,099,975-28,101,615 | + | C2H2g03591 | - | LOC_Os02g50174 | Os02g0734600 | - | Detail |
| C1H2g02030 | 2:28,109,639-28,111,451 | + | C2H2g24372 | CX2g022067 | LOC_Os02g50220 | Os02g0735100 | - | Detail |
| C1H2g29553 | 2:28,115,033-28,118,669 | + | C2H2g15743 | CX2g022006 | LOC_Os02g50230 | Os02g0735100 | - | Detail |
| C1H2g01228 | 2:28,120,600-28,124,341 | - | C2H2g04098 | CX2g020555 | LOC_Os02g50240 | Os02g0735200 | - | Detail |
| C1H2g20929 | 2:28,144,028-28,147,137 | + | C2H2g09760 | CX2g023940 | - | - | - | Detail |
| C1H2g08659 | 2:28,148,927-28,149,775 | + | C2H2g19052 | CX2g024168 | LOC_Os02g50250 | - | - | Detail |
| C1H2g07791 | 2:28,151,395-28,154,493 | + | C2H2g13627 | CX2g019816 | LOC_Os02g50270 | Os02g0735700 | - | Detail |
| C1H2g05849 | 2:28,155,201-28,157,132 | + | C2H2g15470 | CX2g019477 | LOC_Os02g50280 | Os02g0735800 | - | Detail |
| C1H2g22855 | 2:28,158,483-28,160,545 | - | C2H2g10624 | CX2g023040 | LOC_Os02g50290 | Os02g0735900 | - | Detail |
| C1H2g03349 | 2:28,172,410-28,177,664 | + | C2H2g27320 | CX2g019949 | LOC_Os02g50320 | Os02g0736100 | - | Detail |
| C1H2g05522 | 2:28,180,363-28,188,329 | + | C2H2g10188 | CX2g021853 | LOC_Os02g50330 | Os02g0736200 | RDR1, OsRDR1 | Detail |
| C1H2g23012 | 2:28,188,562-28,195,251 | - | C2H2g27537 | CX2g019081 | LOC_Os02g50340 | Os02g0736300 | - | Detail |
| C1H2g06623 | 2:28,196,665-28,200,464 | - | C2H2g19993 | CX2g021694 | LOC_Os02g50350 | Os02g0736400 | OsDHODH1 | Detail |
| C1H2g07187 | 2:28,201,644-28,207,557 | - | C2H2g07436 | CX2g020413 | LOC_Os02g50360 | Os02g0736500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19126 | 4:28,482,932-28,483,633 | - | C1H4g06177 | CX4g036135 | LOC_Os04g55520 | Os04g0648900 | - | Detail |
| C2H4g07264 | 4:28,514,758-28,515,506 | + | C1H4g09680 | - | LOC_Os04g55560 | - | - | Detail |
| C2H4g14278 | 4:28,515,961-28,517,749 | + | C1H4g09680 | CX4g031647 | LOC_Os04g55560 | Os04g0649100 | SHAT1, AP2/EREBP#043, AP2/EREBP43 | Detail |
| C2H4g17474 | 4:28,522,715-28,529,752 | + | C1H4g00144 | CX4g035239 | LOC_Os04g55570 | Os04g0649200 | - | Detail |
| C2H4g02532 | 4:28,539,464-28,540,345 | - | C1H4g30735 | CX4g032527 | LOC_Os04g55590 | Os04g0649400 | WOX4, OsWOX4, Os WOX4 | Detail |
| C2H4g16594 | 4:28,545,758-28,546,096 | - | - | CX4g035485 | LOC_Os04g55600 | Os04g0649500 | - | Detail |
| C2H4g01325 | 4:28,552,020-28,552,618 | + | C1H4g22307 | - | - | - | - | Detail |
| C2H4g05985 | 4:28,552,135-28,552,428 | - | - | CX4g035117 | LOC_Os04g55610 | Os04g0649600 | - | Detail |
| C2H4g00524 | 4:28,554,014-28,557,592 | - | C1H4g26510 | CX4g031472 | LOC_Os04g55620 | Os04g0649700 | - | Detail |
| C2H4g24247 | 4:28,561,500-28,562,462 | + | C1H4g26377 | CX4g033189 | LOC_Os04g55640 | Os04g0649900 | - | Detail |
| C2H4g16213 | 4:28,567,208-28,567,720 | - | - | - | - | - | - | Detail |
| C2H4g10875 | 4:28,567,783-28,568,747 | + | C1H4g19253 | CX4g032778 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g01573 | 4:28,569,522-28,573,198 | - | C1H4g30646 | CX4g032034 | LOC_Os04g55650 | Os04g0650000 | - | Detail |
| C2H4g09445 | 4:28,578,934-28,580,745 | - | C1H4g23223 | CX4g034578 | LOC_Os04g55660 | Os04g0650200 | - | Detail |
| C2H4g25070 | 4:28,582,467-28,585,780 | - | C1H4g17876 | CX4g035022 | LOC_Os04g55670 | Os04g0650300 | OsGT43I | Detail |
| C2H4g15264 | 4:28,590,936-28,592,348 | - | C1H4g16494 | CX4g036592 | LOC_Os04g55680 | Os04g0506000 | - | Detail |
| C2H4g30089 | 4:28,593,163-28,595,330 | + | C1H4g20767 | CX4g032417 | LOC_Os04g55690 | Os04g0650500 | - | Detail |
| C2H4g16279 | 4:28,595,912-28,598,901 | - | C1H4g29586 | CX4g034904 | LOC_Os04g55700 | Os04g0650600 | - | Detail |
| C2H4g25286 | 4:28,607,792-28,610,745 | + | C1H4g11243 | CX4g032420 | LOC_Os04g55710 | Os04g0650700 | - | Detail |
| C2H4g06390 | 4:28,613,676-28,616,566 | + | C1H4g03632 | CX4g033907 | LOC_Os04g55720 | Os04g0650800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |