| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g18455 | 1:10,869,338-10,870,522 | - | C2H1g01046 | CX1g001604 | LOC_Os01g22010 | Os01g0323600 | OsSAMS2 | Detail |
| C1H1g29029 | 1:10,928,820-10,932,088 | + | C2H1g09786 | CX1g000921 | LOC_Os01g22090 | - | - | Detail |
| C1H1g20195 | 1:10,944,730-10,946,421 | + | C2H1g00382 | CX1g001269 | - | - | - | Detail |
| C1H1g10316 | 1:10,946,519-10,946,881 | + | C2H1g00382 | - | - | - | - | Detail |
| C1H1g15871 | 1:10,966,321-10,972,510 | + | C2H1g10357 | CX1g006222 | LOC_Os01g22230 | Os01g0326000 | - | Detail |
| C1H1g24816 | 1:10,978,161-10,982,586 | + | C2H1g20136 | CX1g005114 | LOC_Os01g22249 | Os01g0326300 | - | Detail |
| C1H1g03049 | 1:10,987,524-10,991,725 | + | C2H1g15280 | CX1g004213 | LOC_Os01g22336 | Os01g0327000 | - | Detail |
| C1H1g21696 | 1:10,998,871-11,004,413 | + | C2H1g15493 | CX1g006222 | LOC_Os01g22352 | Os01g0327100 | - | Detail |
| C1H1g31522 | 1:11,012,809-11,016,800 | + | C2H1g29282 | CX1g005114 | LOC_Os01g22370 | Os01g0327400 | - | Detail |
| C1H1g27960 | 1:11,019,379-11,029,188 | - | C2H1g23537 | CX1g002464 | LOC_Os01g22390 | Os01g0327600 | - | Detail |
| C1H1g10725 | 1:11,030,037-11,031,736 | - | C2H1g29147 | CX1g004469 | LOC_Os01g22480 | Os01g0328300 | - | Detail |
| C1H1g31786 | 1:11,039,243-11,041,030 | - | C2H1g29147 | CX1g004469 | LOC_Os01g22430 | Os01g0327900 | - | Detail |
| C1H1g01439 | 1:11,058,971-11,063,256 | - | C2H1g18847 | CX1g002831 | LOC_Os01g22480 | Os01g0328300 | - | Detail |
| C1H1g31467 | 1:11,070,640-11,073,630 | + | C2H1g28322 | CX1g005736 | LOC_Os01g22500 | Os01g0328500 | - | Detail |
| C1H1g21789 | 1:11,074,759-11,078,475 | + | C2H1g27694 | CX1g002258 | LOC_Os01g22510 | Os01g0328600 | - | Detail |
| C1H1g28603 | 1:11,079,379-11,082,663 | - | C2H1g16889 | CX1g003140 | LOC_Os01g22520 | Os01g0328700 | - | Detail |
| C1H1g15186 | 1:11,089,950-11,091,915 | - | C2H1g17731 | CX1g006057 | LOC_Os01g22540 | Os01g0328300 | - | Detail |
| C1H1g04469 | 1:11,094,714-11,101,278 | - | C2H1g07485 | CX1g003742 | LOC_Os01g22550 | Os01g0328900 | - | Detail |
| C1H1g18858 | 1:11,121,849-11,122,506 | - | C2H1g09100 | CX1g005773 | LOC_Os01g22560 | Os01g0329000 | - | Detail |
| C1H1g05350 | 1:11,123,347-11,123,904 | - | C2H1g09100 | CX1g005773 | LOC_Os01g22560 | Os01g0329000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g05876 | 9:16,546,373-16,554,002 | + | C1H9g02458 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C2H9g29007 | 9:16,556,529-16,560,311 | + | C1H9g22232 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C2H9g16087 | 9:16,569,730-16,574,485 | + | C1H9g22572 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C2H9g24094 | 9:16,581,754-16,587,842 | + | C1H9g01976 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C2H9g09810 | 9:16,589,996-16,592,464 | + | C1H9g31066 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C2H9g27580 | 9:16,599,465-16,601,679 | + | C1H9g29777 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C2H9g28610 | 9:16,602,742-16,605,103 | - | C1H9g05594 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C2H9g13596 | 9:16,606,738-16,608,087 | - | C1H9g16500 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C2H9g15981 | 9:16,609,762-16,611,896 | - | C1H9g04875 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C2H9g02236 | 9:16,618,886-16,620,798 | - | C1H9g11387 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C2H9g17381 | 9:16,621,727-16,623,599 | - | C1H9g14135 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C2H9g06782 | 9:16,627,182-16,630,912 | - | C1H9g15525 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C2H9g02430 | 9:16,630,958-16,632,727 | - | C1H9g13578 | - | - | - | - | Detail |
| C2H9g07870 | 9:16,635,801-16,636,391 | + | C1H9g29300 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C2H9g16760 | 9:16,636,412-16,637,056 | + | C1H9g29300 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C2H9g21730 | 9:16,649,061-16,660,781 | - | C1H9g22826 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C2H9g10967 | 9:16,673,243-16,674,601 | + | C1H9g05421 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| C2H9g06327 | 9:16,676,674-16,683,065 | + | C1H9g29478 | CX9g057601 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| C2H9g10101 | 9:16,684,349-16,691,879 | + | C1H9g15901 | CX9g058204 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| C2H9g04957 | 9:16,695,642-16,700,718 | + | C1H9g15862 | CX9g055855 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |