| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g12455 | 2:27,759,013-27,761,019 | - | C2H2g17575 | CX2g022260 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| C1H2g29396 | 2:27,762,537-27,767,929 | + | C2H2g05996 | CX2g024123 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| C1H2g07912 | 2:27,770,339-27,772,392 | - | C2H2g05669 | CX2g019961 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| C1H2g04361 | 2:27,773,129-27,773,822 | - | C2H2g05669 | CX2g019961 | LOC_Os02g49540 | - | - | Detail |
| C1H2g01405 | 2:27,788,678-27,796,648 | - | C2H2g28910 | CX2g021134 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| C1H2g31094 | 2:27,798,551-27,801,281 | + | C2H2g03568 | CX2g022512 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C1H2g01710 | 2:27,805,194-27,808,949 | - | C2H2g04353 | CX2g020763 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| C1H2g15124 | 2:27,813,048-27,814,827 | - | C2H2g01821 | CX2g020190 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| C1H2g22353 | 2:27,815,565-27,818,810 | + | C2H2g11437 | CX2g023333 | LOC_Os02g49620 | Os02g0728700 | - | Detail |
| C1H2g07458 | 2:27,819,531-27,821,044 | + | C2H2g09268 | CX2g023611 | LOC_Os02g49630 | Os02g0728800 | OsTET3 | Detail |
| C1H2g30542 | 2:27,826,303-27,827,821 | + | C2H2g09268 | CX2g021846 | LOC_Os02g49640 | Os02g0189100 | - | Detail |
| C1H2g11463 | 2:27,829,129-27,832,758 | + | C2H2g19272 | CX2g018993 | LOC_Os02g49650 | Os02g0729100 | - | Detail |
| C1H2g21451 | 2:27,834,996-27,836,338 | - | C2H2g16186 | CX2g019218 | LOC_Os02g49660 | Os02g0729200 | OsXyBAT3 | Detail |
| C1H2g08307 | 2:27,837,638-27,839,321 | - | C2H2g16186 | CX2g021273 | - | Os02g0729350 | - | Detail |
| C1H2g10424 | 2:27,840,698-27,842,615 | - | C2H2g22569 | CX2g021202 | LOC_Os02g49680 | Os02g0729400 | - | Detail |
| C1H2g03384 | 2:27,857,021-27,859,261 | + | C2H2g11855 | CX2g022732 | LOC_Os02g49700 | Os02g0729700 | - | Detail |
| C1H2g20265 | 2:27,867,893-27,870,542 | + | C2H2g28980 | CX2g022857 | LOC_Os02g49710 | Os02g0178600 | - | Detail |
| C1H2g00762 | 2:27,870,587-27,874,128 | - | C2H2g24627 | CX2g024291 | LOC_Os02g49720 | Os02g0730000 | ALDH2a | Detail |
| C1H2g11181 | 2:27,875,820-27,878,679 | - | C2H2g28834 | CX2g024916 | LOC_Os02g49730 | Os02g0730100 | - | Detail |
| C1H2g01906 | 2:27,892,031-27,896,722 | + | C2H2g02137 | CX2g021108 | LOC_Os02g49760 | Os02g0730300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23186 | 1:27,269,220-27,271,527 | + | C1H1g25026 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C2H1g16933 | 1:27,272,531-27,277,968 | - | C1H1g17481 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C2H1g28398 | 1:27,285,980-27,289,362 | + | C1H1g18098 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C2H1g03923 | 1:27,293,250-27,293,800 | + | C1H1g05786 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| C2H1g19534 | 1:27,304,010-27,311,886 | + | C1H1g09802 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C2H1g09241 | 1:27,326,536-27,327,972 | + | C1H1g16727 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C2H1g27577 | 1:27,338,608-27,340,083 | + | C1H1g17596 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C2H1g28000 | 1:27,363,984-27,365,414 | - | C1H1g12410 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C2H1g20968 | 1:27,364,009-27,365,288 | + | - | - | - | Os01g0735450 | - | Detail |
| C2H1g21886 | 1:27,365,328-27,367,380 | + | - | - | - | - | - | Detail |
| C2H1g03039 | 1:27,370,524-27,371,948 | - | C1H1g11199 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C2H1g19693 | 1:27,379,721-27,381,136 | - | C1H1g10989 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C2H1g23129 | 1:27,381,416-27,384,963 | + | C1H1g04228 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C2H1g09664 | 1:27,386,344-27,387,096 | + | C1H1g11257 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C2H1g22559 | 1:27,401,377-27,403,368 | + | C1H1g18188 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C2H1g29848 | 1:27,411,208-27,418,789 | + | C1H1g17501 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C2H1g21171 | 1:27,420,379-27,421,816 | + | C1H1g26053 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C2H1g23141 | 1:27,421,843-27,422,460 | + | C1H1g26053 | CX1g007234 | - | Os01g0221600 | OsALMT4 | Detail |
| C2H1g28481 | 1:27,428,371-27,429,000 | + | C1H1g28789 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C2H1g06822 | 1:27,430,737-27,435,013 | - | C1H1g20246 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |