| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24734 | 2:27,612,549-27,617,206 | - | C2H2g15860 | CX2g024558 | LOC_Os02g49150 | Os02g0723300 | - | Detail |
| C1H2g24233 | 2:27,622,626-27,622,877 | + | C2H2g04081 | CX2g024533 | LOC_Os02g49160 | Os02g0723400 | - | Detail |
| C1H2g18213 | 2:27,623,315-27,623,663 | + | C2H2g20481 | CX2g024766 | LOC_Os02g49160 | Os02g0817600 | - | Detail |
| C1H2g16175 | 2:27,625,251-27,629,422 | - | C2H2g22851 | CX2g020430 | LOC_Os02g49180 | Os02g0723600 | - | Detail |
| C1H2g00870 | 2:27,629,824-27,632,226 | + | C2H2g17164 | CX2g020353 | LOC_Os02g49190 | Os02g0723700 | - | Detail |
| C1H2g20021 | 2:27,648,325-27,653,115 | + | C2H2g00357 | CX2g023328 | LOC_Os02g49230 | Os02g0724000 | DTH2, OsCCT08, OsBBX7, OsN | Detail |
| C1H2g09863 | 2:27,657,352-27,661,479 | + | C2H2g14057 | CX2g021258 | LOC_Os02g49260 | Os02g0724500 | - | Detail |
| C1H2g24655 | 2:27,662,296-27,667,448 | + | C2H2g00624 | CX2g020735 | LOC_Os02g49270 | Os02g0724600 | - | Detail |
| C1H2g20212 | 2:27,676,999-27,680,392 | + | C2H2g05357 | CX2g024361 | LOC_Os02g49310 | Os02g0725000 | OsAGC6 | Detail |
| C1H2g12743 | 2:27,682,032-27,685,766 | - | C2H2g11959 | CX2g021752 | LOC_Os02g49320 | Os02g0725100 | - | Detail |
| C1H2g25813 | 2:27,686,562-27,690,996 | + | C2H2g08115 | CX2g019231 | LOC_Os02g49326 | Os02g0725200 | - | Detail |
| C1H2g14119 | 2:27,691,109-27,694,572 | + | C2H2g27630 | CX2g023038 | LOC_Os02g49332 | Os02g0725300 | - | Detail |
| C1H2g16618 | 2:27,698,025-27,698,755 | - | C2H2g22284 | CX2g023830 | LOC_Os02g49350 | Os02g0725500 | - | Detail |
| C1H2g28453 | 2:27,699,390-27,701,648 | + | C2H2g23242 | CX2g023625 | LOC_Os02g49360 | Os02g0725600 | - | Detail |
| C1H2g10199 | 2:27,708,874-27,709,416 | - | C2H2g29177 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C1H2g22692 | 2:27,723,541-27,724,322 | + | - | - | - | - | - | Detail |
| C1H2g05214 | 2:27,736,753-27,740,170 | + | C2H2g05677 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C1H2g12431 | 2:27,744,500-27,748,577 | + | C2H2g30015 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C1H2g21836 | 2:27,752,289-27,753,196 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C1H2g06100 | 2:27,753,386-27,757,067 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03710 | 1:16,361,175-16,372,341 | - | C1H1g30538 | CX1g001585 | LOC_Os01g31870 | Os01g0503400 | - | Detail |
| C2H1g08008 | 1:16,382,271-16,382,919 | + | C1H1g06595 | CX1g001150 | LOC_Os01g31920 | - | - | Detail |
| C2H1g11121 | 1:16,406,072-16,413,072 | - | C1H1g01852 | CX1g003197 | LOC_Os01g31980 | Os01g0684900 | - | Detail |
| C2H1g17778 | 1:16,441,177-16,445,278 | + | C1H1g02771 | CX1g001358 | LOC_Os01g32080 | Os01g0505400 | - | Detail |
| C2H1g04751 | 1:16,453,604-16,455,893 | + | C1H1g20702 | CX1g000996 | LOC_Os01g32130 | Os01g0505700 | - | Detail |
| C2H1g26570 | 1:16,476,670-16,479,033 | + | C1H1g23126 | CX1g005476 | LOC_Os01g32170 | Os01g0506100 | OsSOAR1 | Detail |
| C2H1g29800 | 1:16,483,790-16,498,491 | - | C1H1g02660 | CX1g005140 | LOC_Os01g32184 | Os01g0506200 | - | Detail |
| C2H1g17425 | 1:16,521,821-16,525,026 | + | C1H1g06160 | CX1g003158 | LOC_Os01g32259 | - | - | Detail |
| C2H1g20888 | 1:16,550,811-16,554,225 | + | C1H1g14708 | CX1g001329 | LOC_Os01g32280 | Os01g0507300 | - | Detail |
| C2H1g26772 | 1:16,557,286-16,563,152 | + | C1H1g29043 | CX1g002600 | LOC_Os01g32300 | Os01g0507500 | - | Detail |
| C2H1g00298 | 1:16,568,750-16,569,268 | + | C1H1g19788 | CX1g002379 | LOC_Os10g33130 | Os01g0515300 | - | Detail |
| C2H1g17560 | 1:16,582,918-16,583,550 | + | C1H1g19941 | CX1g003291 | LOC_Os01g32330 | Os01g0507700 | - | Detail |
| C2H1g02648 | 1:16,588,134-16,593,835 | + | C1H1g02444 | CX1g000173 | LOC_Os01g32350 | Os01g0507900 | - | Detail |
| C2H1g18654 | 1:16,597,259-16,606,046 | + | C1H1g29270 | CX1g003736 | LOC_Os01g32364 | Os01g0508000 | - | Detail |
| C2H1g13741 | 1:16,655,931-16,657,847 | + | C1H1g14681 | CX1g003494 | - | - | - | Detail |
| C2H1g19341 | 1:16,721,440-16,724,637 | + | C1H1g15462 | CX1g001437 | LOC_Os01g32640 | Os01g0509900 | - | Detail |
| C2H1g03532 | 1:16,737,676-16,742,714 | + | C1H1g09530 | CX1g000669 | LOC_Os01g32660 | Os01g0510100 | OsMKK6, OsMEK1 | Detail |
| C2H1g05772 | 1:16,753,661-16,768,129 | + | C1H1g03786 | CX1g001061 | LOC_Os01g32710 | Os01g0510500 | - | Detail |
| C2H1g08671 | 1:16,769,024-16,772,790 | - | C1H1g15241 | CX1g004721 | LOC_Os01g32730 | Os01g0510600 | OsFLU1, OXP | Detail |
| C2H1g26446 | 1:16,781,312-16,789,002 | - | C1H1g26631 | CX1g000908 | LOC_Os01g32750 | Os01g0510800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |