| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24734 | 2:27,612,549-27,617,206 | - | C2H2g15860 | CX2g024558 | LOC_Os02g49150 | Os02g0723300 | - | Detail |
| C1H2g24233 | 2:27,622,626-27,622,877 | + | C2H2g04081 | CX2g024533 | LOC_Os02g49160 | Os02g0723400 | - | Detail |
| C1H2g18213 | 2:27,623,315-27,623,663 | + | C2H2g20481 | CX2g024766 | LOC_Os02g49160 | Os02g0817600 | - | Detail |
| C1H2g16175 | 2:27,625,251-27,629,422 | - | C2H2g22851 | CX2g020430 | LOC_Os02g49180 | Os02g0723600 | - | Detail |
| C1H2g00870 | 2:27,629,824-27,632,226 | + | C2H2g17164 | CX2g020353 | LOC_Os02g49190 | Os02g0723700 | - | Detail |
| C1H2g20021 | 2:27,648,325-27,653,115 | + | C2H2g00357 | CX2g023328 | LOC_Os02g49230 | Os02g0724000 | DTH2, OsCCT08, OsBBX7, OsN | Detail |
| C1H2g09863 | 2:27,657,352-27,661,479 | + | C2H2g14057 | CX2g021258 | LOC_Os02g49260 | Os02g0724500 | - | Detail |
| C1H2g24655 | 2:27,662,296-27,667,448 | + | C2H2g00624 | CX2g020735 | LOC_Os02g49270 | Os02g0724600 | - | Detail |
| C1H2g20212 | 2:27,676,999-27,680,392 | + | C2H2g05357 | CX2g024361 | LOC_Os02g49310 | Os02g0725000 | OsAGC6 | Detail |
| C1H2g12743 | 2:27,682,032-27,685,766 | - | C2H2g11959 | CX2g021752 | LOC_Os02g49320 | Os02g0725100 | - | Detail |
| C1H2g25813 | 2:27,686,562-27,690,996 | + | C2H2g08115 | CX2g019231 | LOC_Os02g49326 | Os02g0725200 | - | Detail |
| C1H2g14119 | 2:27,691,109-27,694,572 | + | C2H2g27630 | CX2g023038 | LOC_Os02g49332 | Os02g0725300 | - | Detail |
| C1H2g16618 | 2:27,698,025-27,698,755 | - | C2H2g22284 | CX2g023830 | LOC_Os02g49350 | Os02g0725500 | - | Detail |
| C1H2g28453 | 2:27,699,390-27,701,648 | + | C2H2g23242 | CX2g023625 | LOC_Os02g49360 | Os02g0725600 | - | Detail |
| C1H2g10199 | 2:27,708,874-27,709,416 | - | C2H2g29177 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C1H2g22692 | 2:27,723,541-27,724,322 | + | - | - | - | - | - | Detail |
| C1H2g05214 | 2:27,736,753-27,740,170 | + | C2H2g05677 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C1H2g12431 | 2:27,744,500-27,748,577 | + | C2H2g30015 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C1H2g21836 | 2:27,752,289-27,753,196 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C1H2g06100 | 2:27,753,386-27,757,067 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g24428 | 4:2,977,125-2,977,990 | + | C1H4g20470 | CX4g033304 | - | Os04g0137550 | - | Detail |
| C2H4g26531 | 4:2,979,488-2,983,663 | - | C1H4g26592 | CX4g033840 | LOC_Os04g06970 | Os04g0152500 | - | Detail |
| C2H4g17942 | 4:3,070,972-3,073,017 | + | C1H4g02137 | CX4g035962 | LOC_Os04g06840 | Os04g0152400 | - | Detail |
| C2H4g06170 | 4:3,093,550-3,095,070 | + | C1H4g29986 | CX4g036649 | LOC_Os04g06990 | Os04g0154000 | - | Detail |
| C2H4g16966 | 4:3,110,419-3,111,874 | + | C1H4g15337 | CX4g033486 | LOC_Os04g07830 | Os04g0155000 | - | Detail |
| C2H4g24610 | 4:3,346,329-3,351,441 | + | C1H4g11471 | CX4g033540 | LOC_Os04g07280 | Os04g0156200 | - | Detail |
| C2H4g20575 | 4:3,356,195-3,357,726 | + | C1H4g30323 | CX4g031884 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| C2H4g00652 | 4:3,358,943-3,359,918 | - | C1H4g00067 | CX4g033462 | LOC_Os04g07970 | - | - | Detail |
| C2H4g19281 | 4:3,406,415-3,410,906 | + | C1H4g18551 | CX4g033540 | LOC_Os04g07280 | Os04g0155200 | - | Detail |
| C2H4g06576 | 4:3,553,190-3,555,886 | + | C1H4g01540 | CX4g034106 | LOC_Os04g07890 | Os04g0155200 | - | Detail |
| C2H4g06548 | 4:3,642,958-3,644,247 | - | C1H4g15337 | CX4g035400 | LOC_Os04g07830 | Os04g0160600 | - | Detail |
| C2H4g27562 | 4:3,684,733-3,686,928 | + | C1H4g12963 | CX4g033885 | LOC_Os04g07890 | Os04g0161100 | - | Detail |
| C2H4g26223 | 4:3,709,696-3,711,215 | + | C1H4g30323 | CX4g033924 | LOC_Os04g07920 | Os04g0161400 | - | Detail |
| C2H4g21151 | 4:3,747,226-3,753,353 | + | C1H4g27809 | CX4g033812 | LOC_Os04g07200 | Os04g0161850 | - | Detail |
| C2H4g10368 | 4:3,759,880-3,775,713 | + | C1H4g19033 | CX4g034915 | LOC_Os04g08034 | Os04g0162100 | - | Detail |
| C2H4g24447 | 4:3,781,219-3,782,259 | + | C1H4g29541 | CX4g032410 | LOC_Os04g08060 | Os04g0162500 | - | Detail |
| C2H4g00154 | 4:3,790,826-3,791,098 | + | C1H4g24154 | CX4g031783 | LOC_Os01g18970 | Os04g0651000 | - | Detail |
| C2H4g27755 | 4:3,810,420-3,812,677 | + | C1H4g17619 | CX4g031878 | LOC_Os04g08080 | Os04g0162800 | - | Detail |
| C2H4g18612 | 4:3,829,849-3,831,032 | + | C1H4g00901 | - | LOC_Os04g08180 | - | - | Detail |
| C2H4g29845 | 4:3,833,367-3,836,470 | + | C1H4g25842 | CX4g033256 | LOC_Os04g08190 | Os04g0163800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |