| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24734 | 2:27,612,549-27,617,206 | - | C2H2g15860 | CX2g024558 | LOC_Os02g49150 | Os02g0723300 | - | Detail |
| C1H2g24233 | 2:27,622,626-27,622,877 | + | C2H2g04081 | CX2g024533 | LOC_Os02g49160 | Os02g0723400 | - | Detail |
| C1H2g18213 | 2:27,623,315-27,623,663 | + | C2H2g20481 | CX2g024766 | LOC_Os02g49160 | Os02g0817600 | - | Detail |
| C1H2g16175 | 2:27,625,251-27,629,422 | - | C2H2g22851 | CX2g020430 | LOC_Os02g49180 | Os02g0723600 | - | Detail |
| C1H2g00870 | 2:27,629,824-27,632,226 | + | C2H2g17164 | CX2g020353 | LOC_Os02g49190 | Os02g0723700 | - | Detail |
| C1H2g20021 | 2:27,648,325-27,653,115 | + | C2H2g00357 | CX2g023328 | LOC_Os02g49230 | Os02g0724000 | DTH2, OsCCT08, OsBBX7, OsN | Detail |
| C1H2g09863 | 2:27,657,352-27,661,479 | + | C2H2g14057 | CX2g021258 | LOC_Os02g49260 | Os02g0724500 | - | Detail |
| C1H2g24655 | 2:27,662,296-27,667,448 | + | C2H2g00624 | CX2g020735 | LOC_Os02g49270 | Os02g0724600 | - | Detail |
| C1H2g20212 | 2:27,676,999-27,680,392 | + | C2H2g05357 | CX2g024361 | LOC_Os02g49310 | Os02g0725000 | OsAGC6 | Detail |
| C1H2g12743 | 2:27,682,032-27,685,766 | - | C2H2g11959 | CX2g021752 | LOC_Os02g49320 | Os02g0725100 | - | Detail |
| C1H2g25813 | 2:27,686,562-27,690,996 | + | C2H2g08115 | CX2g019231 | LOC_Os02g49326 | Os02g0725200 | - | Detail |
| C1H2g14119 | 2:27,691,109-27,694,572 | + | C2H2g27630 | CX2g023038 | LOC_Os02g49332 | Os02g0725300 | - | Detail |
| C1H2g16618 | 2:27,698,025-27,698,755 | - | C2H2g22284 | CX2g023830 | LOC_Os02g49350 | Os02g0725500 | - | Detail |
| C1H2g28453 | 2:27,699,390-27,701,648 | + | C2H2g23242 | CX2g023625 | LOC_Os02g49360 | Os02g0725600 | - | Detail |
| C1H2g10199 | 2:27,708,874-27,709,416 | - | C2H2g29177 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C1H2g22692 | 2:27,723,541-27,724,322 | + | - | - | - | - | - | Detail |
| C1H2g05214 | 2:27,736,753-27,740,170 | + | C2H2g05677 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C1H2g12431 | 2:27,744,500-27,748,577 | + | C2H2g30015 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C1H2g21836 | 2:27,752,289-27,753,196 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C1H2g06100 | 2:27,753,386-27,757,067 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g28677 | 10:12,210,729-12,211,140 | - | C1H10g04830 | - | - | Os10g0443100 | - | Detail |
| C2H10g07446 | 10:12,214,272-12,215,548 | - | C1H10g27609 | CX10g009162 | LOC_Os10g25660 | Os10g0396100 | - | Detail |
| C2H10g24522 | 10:12,219,878-12,221,398 | - | C1H10g05232 | CX10g009659 | LOC_Os10g25674 | Os10g0396300 | - | Detail |
| C2H10g17003 | 10:12,225,620-12,234,604 | - | C1H10g23576 | CX10g009137 | LOC_Os10g25680 | Os10g0396400 | - | Detail |
| C2H10g12669 | 10:12,243,782-12,244,334 | - | C1H10g24581 | CX10g010258 | - | - | - | Detail |
| C2H10g29107 | 10:12,248,697-12,249,690 | - | C1H10g11915 | CX10g010258 | - | - | - | Detail |
| C2H10g07060 | 10:12,252,675-12,255,398 | - | C1H10g21280 | CX10g008319 | LOC_Os10g25770 | Os10g0397200 | - | Detail |
| C2H10g14751 | 10:12,256,320-12,256,577 | - | C1H10g07965 | - | - | - | - | Detail |
| C2H10g21864 | 10:12,258,669-12,262,250 | - | C1H10g09327 | CX10g010231 | LOC_Os10g25780 | Os10g0397400 | BRD2, LTBSG1, LHDD10 | Detail |
| C2H10g29265 | 10:12,275,218-12,276,234 | + | - | CX10g008330 | LOC_Os10g25810 | - | - | Detail |
| C2H10g15994 | 10:12,285,300-12,286,316 | - | C1H10g16462 | - | LOC_Os10g25830 | Os10g0397800 | - | Detail |
| C2H10g21528 | 10:12,290,611-12,292,089 | + | C1H10g17522 | - | LOC_Os10g25850 | Os10g0397900 | OsNF-YA8, HAP2I | Detail |
| C2H10g17630 | 10:12,292,991-12,293,488 | - | C1H10g18755 | CX10g007423 | LOC_Os10g25870 | Os10g0398100 | - | Detail |
| C2H10g19565 | 10:12,297,751-12,298,310 | - | C1H10g11467 | CX10g009391 | LOC_Os10g25900 | Os10g0398100 | - | Detail |
| C2H10g18601 | 10:12,316,759-12,321,853 | + | C1H10g22280 | CX10g010303 | LOC_Os10g25930 | Os10g0399100 | - | Detail |
| C2H10g14508 | 10:12,327,562-12,329,276 | - | C1H10g14564 | CX10g009518 | LOC_Os10g25950 | Os10g0399200 | - | Detail |
| C2H10g22858 | 10:12,330,476-12,330,715 | - | - | CX10g009929 | - | - | - | Detail |
| C2H10g19313 | 10:12,336,085-12,336,297 | + | C1H10g16699 | CX10g008093 | LOC_Os10g26010 | Os10g0399700 | - | Detail |
| C2H10g05699 | 10:12,340,743-12,342,906 | + | C1H10g16699 | CX10g008093 | LOC_Os10g26010 | Os10g0399700 | - | Detail |
| C2H10g22042 | 10:12,350,090-12,354,024 | + | C1H10g15927 | CX10g009163 | LOC_Os10g26050 | Os10g0400100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |