| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g04003 | 2:27,477,941-27,478,566 | - | C2H2g26609 | CX2g023306 | LOC_Os02g48820 | Os02g0720100 | - | Detail |
| C1H2g28119 | 2:27,479,305-27,483,451 | + | C2H2g17849 | CX2g022662 | LOC_Os02g48830 | Os02g0720200 | - | Detail |
| C1H2g04549 | 2:27,484,204-27,486,971 | + | C2H2g12963 | CX2g023752 | LOC_Os02g48840 | Os02g0720300 | - | Detail |
| C1H2g03370 | 2:27,488,401-27,490,404 | + | C2H2g12542 | CX2g018926 | LOC_Os02g48850 | Os02g0720400 | - | Detail |
| C1H2g06652 | 2:27,491,276-27,493,421 | + | C2H2g09168 | CX2g020411 | LOC_Os02g48860 | Os02g0720500 | - | Detail |
| C1H2g20338 | 2:27,494,695-27,496,503 | - | C2H2g25224 | CX2g020891 | LOC_Os02g48870 | Os02g0720600 | - | Detail |
| C1H2g31471 | 2:27,502,503-27,507,749 | - | - | CX2g023341 | LOC_Os02g48880 | Os02g0720700 | - | Detail |
| C1H2g28436 | 2:27,512,345-27,517,322 | + | C2H2g25425 | CX2g021948 | LOC_Os02g48900 | Os02g0720900 | - | Detail |
| C1H2g09094 | 2:27,521,081-27,521,911 | - | C2H2g11386 | CX2g024396 | LOC_Os02g48910 | Os02g0721100 | - | Detail |
| C1H2g12153 | 2:27,523,601-27,524,627 | - | C2H2g09000 | CX2g021720 | LOC_Os02g48920 | Os02g0721200 | - | Detail |
| C1H2g23667 | 2:27,526,738-27,527,974 | - | C2H2g01560 | CX2g021720 | LOC_Os02g48950 | Os02g0721100 | - | Detail |
| C1H2g21993 | 2:27,528,607-27,535,776 | - | C2H2g23285 | - | LOC_Os02g48964 | Os02g0721600 | - | Detail |
| C1H2g06282 | 2:27,539,621-27,541,699 | - | C2H2g14813 | CX2g023863 | LOC_Os02g48980 | Os02g0721700 | - | Detail |
| C1H2g28541 | 2:27,542,875-27,548,996 | - | C2H2g03395 | CX2g019956 | LOC_Os02g48990 | Os02g0721800 | OsSec14-9 | Detail |
| C1H2g27760 | 2:27,551,022-27,556,426 | - | C2H2g05054 | CX2g018869 | LOC_Os02g49030 | Os02g0722001 | - | Detail |
| C1H2g15238 | 2:27,558,083-27,561,361 | + | C2H2g07315 | CX2g022151 | LOC_Os02g49050 | Os02g0722300 | - | Detail |
| C1H2g27060 | 2:27,565,359-27,571,809 | + | C2H2g28450 | CX2g020972 | LOC_Os02g49060 | Os02g0722400 | - | Detail |
| C1H2g28181 | 2:27,572,199-27,578,999 | - | C2H2g03918 | CX2g019945 | LOC_Os02g49070 | Os02g0722500 | - | Detail |
| C1H2g28597 | 2:27,587,417-27,592,011 | + | C2H2g17328 | CX2g020919 | LOC_Os02g49080 | Os02g0722700 | - | Detail |
| C1H2g02362 | 2:27,593,049-27,602,316 | - | C2H2g17496 | CX2g020883 | LOC_Os02g49090 | Os02g0722800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g10462 | 7:14,419,214-14,420,446 | + | C1H7g00019 | CX7g048970 | LOC_Os07g29760 | Os07g0480900 | - | Detail |
| C2H7g05929 | 7:14,423,723-14,430,878 | + | C1H7g31797 | - | LOC_Os07g29770 | Os07g0481000 | - | Detail |
| C2H7g12520 | 7:14,429,832-14,432,185 | - | C1H7g17042 | CX7g047934 | LOC_Os07g29780 | Os07g0481100 | - | Detail |
| C2H7g04918 | 7:14,436,867-14,437,607 | + | - | - | - | - | - | Detail |
| C2H7g17914 | 7:14,439,990-14,442,145 | + | C1H7g08825 | CX7g047784 | LOC_Os07g29794 | Os07g0481200 | - | Detail |
| C2H7g08081 | 7:14,447,571-14,451,581 | + | C1H7g01187 | CX7g048988 | LOC_Os07g29810 | Os07g0481300 | - | Detail |
| C2H7g20657 | 7:14,453,563-14,458,844 | - | C1H7g17999 | CX7g048988 | LOC_Os07g29820 | Os07g0481400 | - | Detail |
| C2H7g01767 | 7:14,466,272-14,467,195 | + | C1H7g20643 | CX7g049622 | LOC_Os07g31070 | Os07g0482433 | - | Detail |
| C2H7g00792 | 7:14,471,438-14,473,257 | + | C1H7g12460 | CX7g046236 | LOC_Os07g29830 | Os07g0492966 | - | Detail |
| C2H7g03865 | 7:14,484,618-14,487,304 | - | C1H7g25439 | CX7g046285 | LOC_Os07g29960 | Os07g0482900 | - | Detail |
| C2H7g23671 | 7:14,508,415-14,508,807 | + | - | - | LOC_Os07g34450 | - | - | Detail |
| C2H7g21827 | 7:14,512,350-14,513,451 | + | C1H7g27243 | - | - | Os07g0483400 | - | Detail |
| C2H7g12658 | 7:14,515,686-14,518,721 | - | C1H7g00758 | CX7g046925 | LOC_Os07g30020 | Os07g0483500 | - | Detail |
| C2H7g24842 | 7:14,539,940-14,541,355 | + | C1H7g20920 | CX7g049843 | LOC_Os07g30090 | Os07g0484200 | - | Detail |
| C2H7g15400 | 7:14,543,585-14,555,548 | - | C1H7g24417 | CX7g047443 | LOC_Os07g30100 | Os07g0484300 | - | Detail |
| C2H7g08443 | 7:14,579,236-14,582,952 | + | C1H7g17450 | CX7g046292 | LOC_Os07g30110 | Os07g0484500 | - | Detail |
| C2H7g28168 | 7:14,585,925-14,593,326 | - | C1H7g29847 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C2H7g17517 | 7:14,598,415-14,599,725 | - | C1H7g20780 | - | LOC_Os07g30150 | Os07g0484800 | - | Detail |
| C2H7g13834 | 7:14,615,460-14,617,479 | + | C1H7g14423 | CX7g047351 | LOC_Os07g30160 | Os07g0485000 | - | Detail |
| C2H7g08877 | 7:14,617,734-14,620,873 | - | C1H7g26216 | CX7g048078 | LOC_Os07g30170 | Os07g0485100 | Osb-UP, Osbeta-UP, Osβ-UP | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |