| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g04067 | 2:27,253,171-27,253,504 | - | C2H2g29012 | - | - | Os02g0715250 | - | Detail |
| C1H2g08660 | 2:27,253,991-27,254,281 | - | - | - | - | - | - | Detail |
| C1H2g16891 | 2:27,292,691-27,293,857 | - | C2H2g10463 | CX2g023440 | LOC_Os02g48560 | Os02g0716500 | - | Detail |
| C1H2g01901 | 2:27,303,466-27,308,305 | - | C2H2g21774 | CX2g020074 | LOC_Os02g48570 | Os02g0716800 | - | Detail |
| C1H2g08993 | 2:27,312,477-27,314,508 | + | C2H2g14528 | CX2g019155 | LOC_Os02g48590 | Os02g0717100 | - | Detail |
| C1H2g09406 | 2:27,322,312-27,322,726 | + | C2H2g18913 | CX2g023240 | LOC_Os02g48610 | Os02g0717300 | - | Detail |
| C1H2g19653 | 2:27,326,765-27,338,465 | - | C2H2g28722 | CX2g019132 | LOC_Os02g48620 | Os02g0717400 | - | Detail |
| C1H2g29287 | 2:27,345,603-27,348,179 | + | C2H2g29775 | CX2g024079 | LOC_Os02g48630 | Os02g0717500 | - | Detail |
| C1H2g12467 | 2:27,348,348-27,352,014 | - | C2H2g23859 | CX2g021186 | LOC_Os02g48640 | Os02g0717600 | - | Detail |
| C1H2g15048 | 2:27,357,842-27,359,307 | - | C2H2g12036 | CX2g021971 | LOC_Os02g48660 | - | - | Detail |
| C1H2g27254 | 2:27,362,701-27,363,306 | + | C2H2g28577 | CX2g024923 | LOC_Os02g48680 | Os02g0718000 | - | Detail |
| C1H2g08324 | 2:27,380,011-27,381,503 | - | - | CX2g020343 | - | - | - | Detail |
| C1H2g04979 | 2:27,390,159-27,397,523 | + | C2H7g12708 | CX2g020470 | - | - | - | Detail |
| C1H2g27172 | 2:27,403,218-27,403,573 | - | C2H2g17849 | CX2g022662 | LOC_Os02g48830 | Os02g0720200 | - | Detail |
| C1H2g26643 | 2:27,413,215-27,413,701 | + | C2H2g24080 | CX2g020985 | LOC_Os02g42870 | Os02g0641900 | OsMYB38 | Detail |
| C1H2g29414 | 2:27,418,955-27,422,380 | + | C2H2g02359 | CX2g024042 | LOC_Os02g48720 | Os02g0718900 | - | Detail |
| C1H2g26150 | 2:27,426,488-27,428,998 | + | C2H2g20525 | CX2g021808 | LOC_Os02g48730 | Os02g0719000 | - | Detail |
| C1H2g28212 | 2:27,432,505-27,437,280 | + | C2H2g12096 | CX2g021733 | LOC_Os02g48740 | Os02g0719100 | - | Detail |
| C1H2g06293 | 2:27,453,050-27,454,936 | + | C2H2g00700 | CX2g022686 | LOC_Os02g48770 | Os02g0719600 | - | Detail |
| C1H2g12998 | 2:27,461,721-27,469,872 | + | C2H2g24831 | CX2g022881 | LOC_Os02g48790 | Os02g0719800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g24769 | 1:6,366,071-6,369,837 | - | C1H1g19893 | CX1g004836 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| C2H1g00699 | 1:6,371,690-6,375,810 | - | C1H1g14653 | CX1g001640 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| C2H1g15617 | 1:6,384,169-6,392,026 | + | C1H1g26396 | CX1g006490 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| C2H1g03922 | 1:6,393,549-6,397,022 | - | C1H1g13199 | CX1g006720 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| C2H1g15811 | 1:6,397,263-6,397,838 | - | C1H1g07711 | - | - | - | - | Detail |
| C2H1g14330 | 1:6,397,298-6,405,488 | + | C1H1g15790 | CX1g003875 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| C2H1g05009 | 1:6,428,038-6,433,276 | + | C1H1g29443 | CX1g001622 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| C2H1g10198 | 1:6,434,113-6,436,458 | - | C1H1g08244 | CX1g003284 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| C2H1g13210 | 1:6,442,722-6,444,692 | + | C1H1g30145 | CX1g003413 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| C2H1g03678 | 1:6,445,204-6,446,334 | + | C1H1g25208 | CX1g004766 | LOC_Os01g12920 | Os01g0229600 | - | Detail |
| C2H1g05903 | 1:6,447,103-6,453,778 | - | C1H1g01831 | CX1g005969 | LOC_Os01g12930 | Os01g0229700 | - | Detail |
| C2H1g00149 | 1:6,457,701-6,459,828 | - | C1H1g16126 | CX1g000942 | LOC_Os01g12940 | Os01g0229800 | - | Detail |
| C2H1g27747 | 1:6,473,366-6,481,075 | - | C1H1g06612 | CX1g003754 | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| C2H1g20912 | 1:6,512,790-6,516,964 | + | C1H1g30420 | CX1g006768 | LOC_Os01g13030 | Os01g0231000 | - | Detail |
| C2H1g03048 | 1:6,528,786-6,534,700 | + | C1H1g30529 | CX1g002350 | LOC_Os01g13060 | Os01g0231500 | - | Detail |
| C2H1g22889 | 1:6,539,651-6,541,263 | + | C1H1g25386 | CX1g004775 | LOC_Os01g13070 | Os01g0231600 | - | Detail |
| C2H1g30242 | 1:6,542,597-6,543,746 | - | C1H1g25919 | CX1g000758 | LOC_Os01g13080 | Os01g0231700 | OsP3B | Detail |
| C2H1g00380 | 1:6,544,772-6,548,593 | + | C1H1g30419 | CX1g004219 | LOC_Os01g13090 | Os01g0231800 | - | Detail |
| C2H1g07330 | 1:6,550,709-6,556,293 | + | C1H1g05372 | CX1g004219 | LOC_Os01g13100 | Os01g0231900 | - | Detail |
| C2H1g24942 | 1:6,559,697-6,560,533 | + | C1H1g03374 | CX1g004133 | LOC_Os01g13120 | Os01g0232000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |