| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g18935 | 2:26,915,936-26,922,192 | + | C2H2g27403 | CX2g022212 | LOC_Os02g47860 | Os02g0708200 | - | Detail |
| C1H2g31246 | 2:26,923,609-26,924,109 | + | C2H2g11560 | CX2g021188 | LOC_Os02g47870 | Os02g0708300 | - | Detail |
| C1H2g01202 | 2:26,926,373-26,930,566 | - | C2H2g06558 | CX2g019740 | LOC_Os02g47880 | Os02g0708400 | - | Detail |
| C1H2g24614 | 2:26,933,543-26,946,033 | + | C2H2g17005 | CX2g024228 | LOC_Os02g47900 | Os02g0708600 | - | Detail |
| C1H2g18977 | 2:26,960,625-26,964,377 | + | C2H2g02283 | CX2g019743 | LOC_Os02g47920 | Os02g0709000 | - | Detail |
| C1H2g24640 | 2:26,963,174-26,965,017 | - | C2H2g07338 | CX2g024449 | LOC_Os02g47930 | Os02g0709100 | - | Detail |
| C1H2g24357 | 2:26,966,256-26,969,644 | - | C2H2g20073 | CX2g020361 | LOC_Os02g47940 | Os02g0709200 | - | Detail |
| C1H2g24881 | 2:26,977,178-26,979,224 | - | C2H2g16866 | CX2g023336 | - | - | - | Detail |
| C1H2g07319 | 2:26,979,410-26,995,318 | + | C2H2g03574 | CX2g019810 | LOC_Os02g47970 | Os02g0709400 | - | Detail |
| C1H2g00359 | 2:27,002,147-27,003,140 | + | C2H2g06342 | CX2g024794 | LOC_Os02g47980 | Os02g0709600 | OsMIZ1 | Detail |
| C1H2g25876 | 2:27,008,502-27,016,778 | - | C2H2g04995 | CX2g021355 | LOC_Os02g48000 | Os02g0709800 | OsGAP1 | Detail |
| C1H2g10122 | 2:27,018,166-27,024,305 | - | C2H2g05556 | CX2g021782 | LOC_Os02g48010 | Os02g0710102 | - | Detail |
| C1H2g01956 | 2:27,035,703-27,036,453 | - | C2H2g10833 | CX2g019618 | LOC_Os02g48030 | - | - | Detail |
| C1H2g13754 | 2:27,057,084-27,058,172 | + | C2H2g30439 | CX2g023675 | LOC_Os02g48060 | Os02g0710300 | OsbHLH126, OsRSL2 | Detail |
| C1H2g13956 | 2:27,063,797-27,066,281 | + | C2H2g01416 | CX2g022189 | LOC_Os02g48080 | Os02g0710500 | ECK1 | Detail |
| C1H2g03210 | 2:27,071,937-27,074,425 | + | C2H2g08370 | CX2g022026 | LOC_Os02g48094 | Os02g0710700 | - | Detail |
| C1H2g05301 | 2:27,077,201-27,087,042 | + | C2H2g13118 | CX2g023149 | LOC_Os02g48100 | Os02g0710800 | - | Detail |
| C1H2g09617 | 2:27,087,557-27,093,365 | + | C2H2g08570 | CX2g024784 | LOC_Os02g48110 | Os02g0710900 | - | Detail |
| C1H2g14761 | 2:27,093,881-27,096,890 | - | C2H2g28485 | CX2g022460 | LOC_Os02g48116 | Os02g0711000 | - | Detail |
| C1H2g26775 | 2:27,101,612-27,103,969 | + | C2H2g00846 | CX2g024643 | LOC_Os02g48130 | Os02g0711200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g19159 | 3:4,560,847-4,564,352 | + | C1H3g27623 | CX3g030601 | LOC_Os03g10190 | Os03g0198400 | - | Detail |
| C2H3g09921 | 3:4,570,322-4,572,644 | + | C1H3g02850 | CX3g031306 | LOC_Os03g10200 | Os03g0198500 | - | Detail |
| C2H3g24222 | 3:4,574,335-4,575,869 | - | C1H3g04729 | CX3g030929 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| C2H3g01513 | 3:4,585,572-4,585,963 | + | C1H3g24941 | - | - | - | - | Detail |
| C2H3g16295 | 3:4,593,765-4,595,784 | - | C1H3g23090 | CX3g026889 | LOC_Os03g10220 | - | - | Detail |
| C2H3g19804 | 3:4,596,596-4,599,606 | - | C1H3g13438 | CX3g026154 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| C2H3g09522 | 3:4,599,798-4,604,196 | + | C1H3g16749 | CX3g028745 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| C2H3g01585 | 3:4,609,414-4,610,589 | + | C1H3g12272 | CX3g029096 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| C2H3g23420 | 3:4,621,273-4,622,353 | - | C1H3g00274 | CX3g031305 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| C2H3g26891 | 3:4,639,608-4,640,847 | + | C1H3g07008 | CX3g025392 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| C2H3g01636 | 3:4,654,885-4,656,386 | + | C1H3g12286 | CX3g029912 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| C2H3g23926 | 3:4,662,597-4,663,344 | + | C1H3g29696 | CX3g028962 | - | - | - | Detail |
| C2H3g07176 | 3:4,664,495-4,666,798 | + | C1H3g13020 | CX3g025427 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| C2H3g17766 | 3:4,666,929-4,671,061 | - | C1H3g29298 | CX3g027963 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| C2H3g08890 | 3:4,673,665-4,676,594 | - | C1H3g01933 | CX3g025362 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| C2H3g09465 | 3:4,677,826-4,680,128 | - | C1H3g30301 | CX3g031231 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| C2H3g19650 | 3:4,683,420-4,685,696 | + | C1H3g28372 | CX3g028366 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| C2H3g21201 | 3:4,686,111-4,690,220 | - | C1H3g07769 | CX3g026809 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| C2H3g08749 | 3:4,690,383-4,692,431 | + | C1H3g03267 | - | LOC_Os03g10410 | Os03g0201200 | - | Detail |
| C2H3g27980 | 3:4,692,955-4,695,336 | + | C1H3g26783 | CX3g027641 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |