| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g07096 | 2:26,569,714-26,572,122 | + | C2H2g00990 | CX2g019985 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| C1H2g17263 | 2:26,573,070-26,574,402 | - | C2H2g18781 | CX2g018946 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| C1H2g20817 | 2:26,576,566-26,579,572 | - | C2H2g13276 | CX2g022668 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| C1H2g05464 | 2:26,582,274-26,587,006 | + | C2H2g21592 | CX2g021133 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| C1H2g24987 | 2:26,590,387-26,594,037 | - | C2H2g02395 | CX2g022517 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| C1H2g25791 | 2:26,609,172-26,612,861 | - | C2H2g25196 | CX2g022082 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| C1H2g27039 | 2:26,635,044-26,639,407 | + | C2H2g15528 | CX2g023957 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| C1H2g16179 | 2:26,639,960-26,641,086 | - | C2H2g23415 | CX2g020103 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| C1H2g12582 | 2:26,642,996-26,644,943 | + | C2H2g21402 | CX2g021360 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| C1H2g09622 | 2:26,647,658-26,651,101 | + | C2H2g02080 | CX2g022772 | LOC_Os02g47360 | Os02g0702000 | OSOTP51, SSA1 | Detail |
| C1H2g18788 | 2:26,657,284-26,660,559 | + | C2H2g00977 | CX2g019179 | LOC_Os02g47400 | Os02g0702400 | - | Detail |
| C1H2g17296 | 2:26,661,748-26,670,457 | - | C2H2g26384 | CX2g023268 | LOC_Os02g47410 | Os02g0702500 | - | Detail |
| C1H2g14738 | 2:26,675,160-26,681,475 | - | C2H2g00034 | CX2g020864 | LOC_Os02g47420 | Os02g0702600 | - | Detail |
| C1H2g23661 | 2:26,690,376-26,696,845 | - | C2H2g04827 | CX2g020499 | LOC_Os02g47440 | Os02g0702800 | OsSYP21 | Detail |
| C1H2g10840 | 2:26,700,548-26,701,372 | + | C2H2g13380 | CX2g023044 | LOC_Os02g47450 | Os02g0703300 | - | Detail |
| C1H2g06866 | 2:26,713,872-26,715,795 | + | C2H2g24088 | CX2g021944 | LOC_Os02g45280 | Os02g0703600 | OsABA8ox1, CYP707A5 | Detail |
| C1H2g27896 | 2:26,727,221-26,730,378 | + | C2H2g26119 | CX2g022994 | LOC_Os02g47500 | Os02g0703900 | - | Detail |
| C1H2g28522 | 2:26,744,905-26,749,591 | - | C2H2g28790 | CX2g020240 | LOC_Os02g47560 | Os02g0704300 | OsDNA2_6 | Detail |
| C1H2g16636 | 2:26,753,027-26,755,301 | + | C2H2g08817 | CX2g021465 | LOC_Os02g47570 | Os02g0704500 | - | Detail |
| C1H2g16073 | 2:26,755,896-26,760,316 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g17767 | 4:16,868,902-16,869,123 | - | - | - | - | - | - | Detail |
| C2H4g27588 | 4:16,874,997-16,878,447 | - | C1H4g17832 | CX4g033505 | LOC_Os04g32950 | Os04g0402100 | - | Detail |
| C2H4g29861 | 4:16,883,499-16,891,971 | - | C1H4g28962 | CX4g033647 | LOC_Os04g32960 | Os04g0402200 | - | Detail |
| C2H4g17148 | 4:16,896,931-16,899,506 | + | C1H4g29248 | CX4g036231 | LOC_Os04g32970 | Os04g0402300 | - | Detail |
| C2H4g06982 | 4:16,903,917-16,904,946 | - | C1H4g15778 | CX4g035592 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| C2H4g06461 | 4:16,978,397-16,980,226 | + | C1H4g07240 | CX4g036153 | LOC_Os04g33030 | Os04g0403200 | - | Detail |
| C2H4g07757 | 4:16,989,488-16,993,477 | + | C1H4g07835 | CX4g034608 | LOC_Os04g33040 | Os04g0403300 | - | Detail |
| C2H4g27026 | 4:16,993,858-16,998,974 | + | C1H4g10687 | CX4g034506 | LOC_Os04g33050 | Os04g0403400 | - | Detail |
| C2H4g06142 | 4:16,999,493-17,003,341 | + | C1H4g21762 | CX4g033005 | LOC_Os04g33060 | Os04g0403500 | - | Detail |
| C2H4g05650 | 4:17,004,934-17,009,037 | - | C1H4g16707 | CX4g036347 | LOC_Os04g33080 | Os04g0403701 | - | Detail |
| C2H4g08188 | 4:17,033,625-17,034,330 | - | C1H4g29160 | CX4g031400 | LOC_Os04g33110 | Os04g0403900 | - | Detail |
| C2H4g05726 | 4:17,038,269-17,038,834 | - | C1H4g22277 | CX4g033687 | - | - | - | Detail |
| C2H4g02595 | 4:17,055,126-17,056,283 | - | C1H4g01070 | CX4g032114 | LOC_Os04g33150 | Os04g0404400 | TRD4.2 | Detail |
| C2H4g12964 | 4:17,068,439-17,073,756 | + | C1H4g19552 | CX4g035122 | LOC_Os04g33190 | Os04g0404800 | - | Detail |
| C2H4g17158 | 4:17,074,363-17,082,574 | - | C1H4g09341 | CX4g034399 | LOC_Os04g33200 | Os04g0404900 | - | Detail |
| C2H4g18122 | 4:17,087,925-17,093,114 | + | C1H4g00203 | CX4g034889 | LOC_Os04g33210 | Os04g0405000 | - | Detail |
| C2H4g07819 | 4:17,093,907-17,096,569 | - | C1H4g26027 | CX4g033742 | LOC_Os04g33220 | Os04g0405100 | - | Detail |
| C2H4g04199 | 4:17,105,211-17,106,150 | - | C1H4g16846 | CX4g034969 | LOC_Os04g33240 | Os04g0405300 | - | Detail |
| C2H4g22752 | 4:17,116,785-17,117,978 | - | C1H4g08512 | CX4g035634 | LOC_Os04g33260 | Os04g0405500 | - | Detail |
| C2H4g29855 | 4:17,120,942-17,127,086 | - | C1H4g22964 | CX4g036572 | LOC_Os04g33280 | Os04g0405600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |