| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g07096 | 2:26,569,714-26,572,122 | + | C2H2g00990 | CX2g019985 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| C1H2g17263 | 2:26,573,070-26,574,402 | - | C2H2g18781 | CX2g018946 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| C1H2g20817 | 2:26,576,566-26,579,572 | - | C2H2g13276 | CX2g022668 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| C1H2g05464 | 2:26,582,274-26,587,006 | + | C2H2g21592 | CX2g021133 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| C1H2g24987 | 2:26,590,387-26,594,037 | - | C2H2g02395 | CX2g022517 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| C1H2g25791 | 2:26,609,172-26,612,861 | - | C2H2g25196 | CX2g022082 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| C1H2g27039 | 2:26,635,044-26,639,407 | + | C2H2g15528 | CX2g023957 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| C1H2g16179 | 2:26,639,960-26,641,086 | - | C2H2g23415 | CX2g020103 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| C1H2g12582 | 2:26,642,996-26,644,943 | + | C2H2g21402 | CX2g021360 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| C1H2g09622 | 2:26,647,658-26,651,101 | + | C2H2g02080 | CX2g022772 | LOC_Os02g47360 | Os02g0702000 | OSOTP51, SSA1 | Detail |
| C1H2g18788 | 2:26,657,284-26,660,559 | + | C2H2g00977 | CX2g019179 | LOC_Os02g47400 | Os02g0702400 | - | Detail |
| C1H2g17296 | 2:26,661,748-26,670,457 | - | C2H2g26384 | CX2g023268 | LOC_Os02g47410 | Os02g0702500 | - | Detail |
| C1H2g14738 | 2:26,675,160-26,681,475 | - | C2H2g00034 | CX2g020864 | LOC_Os02g47420 | Os02g0702600 | - | Detail |
| C1H2g23661 | 2:26,690,376-26,696,845 | - | C2H2g04827 | CX2g020499 | LOC_Os02g47440 | Os02g0702800 | OsSYP21 | Detail |
| C1H2g10840 | 2:26,700,548-26,701,372 | + | C2H2g13380 | CX2g023044 | LOC_Os02g47450 | Os02g0703300 | - | Detail |
| C1H2g06866 | 2:26,713,872-26,715,795 | + | C2H2g24088 | CX2g021944 | LOC_Os02g45280 | Os02g0703600 | OsABA8ox1, CYP707A5 | Detail |
| C1H2g27896 | 2:26,727,221-26,730,378 | + | C2H2g26119 | CX2g022994 | LOC_Os02g47500 | Os02g0703900 | - | Detail |
| C1H2g28522 | 2:26,744,905-26,749,591 | - | C2H2g28790 | CX2g020240 | LOC_Os02g47560 | Os02g0704300 | OsDNA2_6 | Detail |
| C1H2g16636 | 2:26,753,027-26,755,301 | + | C2H2g08817 | CX2g021465 | LOC_Os02g47570 | Os02g0704500 | - | Detail |
| C1H2g16073 | 2:26,755,896-26,760,316 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02997 | 1:12,233,616-12,239,615 | + | C1H1g02190 | CX1g000047 | LOC_Os01g24680 | Os01g0348600 | - | Detail |
| C2H1g13094 | 1:12,242,301-12,243,912 | + | C1H1g22060 | CX1g006528 | LOC_Os01g24690 | Os01g0348700 | - | Detail |
| C2H1g24178 | 1:12,246,421-12,246,663 | - | C1H1g28108 | CX1g002294 | LOC_Os01g25280 | Os01g0348800 | - | Detail |
| C2H1g30396 | 1:12,253,254-12,253,788 | - | C1H1g00208 | CX1g002294 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| C2H1g24096 | 1:12,270,705-12,275,657 | - | C1H1g16274 | CX1g004857 | LOC_Os01g24750 | Os01g0349400 | - | Detail |
| C2H1g13316 | 1:12,289,183-12,292,326 | + | C1H1g27046 | CX1g000662 | LOC_Os01g24780 | Os01g0349800 | - | Detail |
| C2H1g08931 | 1:12,438,143-12,442,353 | - | C1H1g11336 | CX1g001694 | LOC_Os01g24820 | Os01g0350300 | - | Detail |
| C2H1g21333 | 1:12,460,738-12,468,533 | + | C1H1g00555 | CX1g002860 | LOC_Os01g24880 | Os01g0350900 | IPI1 | Detail |
| C2H1g14607 | 1:12,476,204-12,482,396 | + | C1H1g05982 | CX1g005272 | LOC_Os01g24940 | Os01g0351100 | - | Detail |
| C2H1g09806 | 1:12,493,810-12,500,200 | + | C1H1g06101 | CX1g000433 | LOC_Os01g24940 | Os01g0351200 | - | Detail |
| C2H1g18699 | 1:12,517,727-12,518,452 | - | C1H1g24498 | CX1g006080 | LOC_Os01g24960 | Os01g0351500 | - | Detail |
| C2H1g23303 | 1:12,524,550-12,527,499 | + | C1H1g12342 | CX1g002020 | LOC_Os01g24980 | Os01g0351800 | - | Detail |
| C2H1g18138 | 1:12,531,480-12,534,702 | + | C1H1g19518 | CX1g002475 | LOC_Os01g25010 | Os01g0352100 | - | Detail |
| C2H1g07713 | 1:12,560,452-12,560,833 | + | C1H1g19827 | CX1g006850 | - | - | - | Detail |
| C2H1g05879 | 1:12,560,881-12,563,018 | + | C1H1g05990 | CX1g006850 | - | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g07698 | 1:12,589,870-12,590,804 | + | C1H1g16000 | CX1g003259 | LOC_Os01g25100 | Os01g0353400 | OsGST4 | Detail |
| C2H1g26082 | 1:12,595,884-12,598,643 | + | C1H1g26956 | CX1g006645 | LOC_Os01g25110 | Os01g0353600 | - | Detail |
| C2H1g07502 | 1:12,600,023-12,601,880 | + | - | - | - | - | - | Detail |
| C2H1g18726 | 1:12,605,357-12,605,733 | + | - | - | - | - | - | Detail |
| C2H1g28232 | 1:12,643,628-12,644,232 | - | C1H1g21653 | CX1g000417 | LOC_Os01g25160 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |