| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17371 | 2:25,847,420-25,848,118 | + | C2H2g19834 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C1H2g00614 | 2:25,856,212-25,857,291 | - | C2H2g12350 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C1H2g03932 | 2:25,866,185-25,869,908 | - | C2H2g27051 | CX2g020860 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| C1H2g09273 | 2:25,873,513-25,878,112 | + | C2H2g04078 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C1H2g23248 | 2:25,878,364-25,879,010 | - | C2H2g07890 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C1H2g07518 | 2:25,883,906-25,884,217 | - | C2H2g23208 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C1H2g17890 | 2:25,884,777-25,887,874 | + | C2H2g03417 | CX2g023866 | LOC_Os02g45950 | - | - | Detail |
| C1H2g27881 | 2:25,888,496-25,889,416 | + | C2H2g24497 | CX2g019320 | - | - | - | Detail |
| C1H2g13117 | 2:25,894,999-25,895,906 | - | - | - | - | - | - | Detail |
| C1H2g27343 | 2:25,896,349-25,902,473 | + | C2H2g17403 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C1H2g11465 | 2:25,905,281-25,907,338 | + | C2H2g07817 | CX2g024528 | LOC_Os02g34860 | Os02g0117400 | - | Detail |
| C1H2g12344 | 2:25,909,079-25,910,160 | + | C2H7g03122 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C1H2g24305 | 2:25,912,920-25,915,548 | - | C2H2g27686 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C1H2g27920 | 2:25,926,682-25,929,229 | - | C2H2g27892 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C1H2g28250 | 2:25,931,714-25,936,860 | + | C2H2g03411 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C1H2g04547 | 2:25,949,272-25,953,342 | - | C2H2g06457 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C1H2g29736 | 2:25,953,694-25,958,766 | + | C2H2g09278 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C1H2g13130 | 2:25,961,734-25,962,164 | + | C2H2g01630 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C1H2g25245 | 2:25,963,062-25,967,242 | - | C2H2g28721 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C1H2g26309 | 2:25,974,048-25,974,414 | - | C2H2g18789 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g26482 | 4:22,098,558-22,106,847 | + | C1H4g26953 | CX4g031449 | LOC_Os04g43130 | Os04g0510300 | - | Detail |
| C2H4g00596 | 4:22,107,491-22,113,437 | - | C1H4g20471 | CX4g031438 | LOC_Os04g43140 | Os04g0510400 | - | Detail |
| C2H4g19563 | 4:22,116,219-22,121,802 | + | C1H4g03093 | CX4g035958 | LOC_Os04g43150 | Os04g0510500 | - | Detail |
| C2H4g02205 | 4:22,122,328-22,123,450 | - | C1H4g15211 | CX4g032117 | LOC_Os04g43160 | Os04g0510600 | - | Detail |
| C2H4g20983 | 4:22,124,100-22,126,743 | - | C1H4g29813 | CX4g033894 | LOC_Os04g43164 | Os04g0510700 | - | Detail |
| C2H4g07283 | 4:22,127,825-22,129,146 | - | C1H4g14181 | CX4g036379 | LOC_Os04g43170 | Os04g0510900 | - | Detail |
| C2H4g15069 | 4:22,131,337-22,132,779 | - | C1H4g05553 | CX4g033517 | LOC_Os04g43200 | Os04g0511200 | OsClo5, OsEFA27 | Detail |
| C2H4g28433 | 4:22,134,406-22,136,880 | - | C1H4g09400 | CX4g033340 | LOC_Os04g43210 | Os04g0511400 | - | Detail |
| C2H4g23749 | 4:22,140,348-22,146,256 | - | C1H4g08179 | CX4g035801 | LOC_Os04g43220 | Os04g0511600 | - | Detail |
| C2H4g20352 | 4:22,147,977-22,150,108 | - | C1H4g06483 | CX4g032463 | LOC_Os04g43230 | Os04g0511700 | - | Detail |
| C2H4g11071 | 4:22,153,198-22,154,963 | - | C1H4g23962 | CX4g032044 | LOC_Os04g43270 | - | - | Detail |
| C2H4g07633 | 4:22,155,246-22,159,550 | - | C1H4g23962 | CX4g032044 | LOC_Os04g43270 | Os04g0512200 | - | Detail |
| C2H4g01985 | 4:22,163,259-22,165,833 | - | C1H4g05127 | CX4g033280 | LOC_Os04g43290 | Os04g0512300 | OsGASD | Detail |
| C2H4g16701 | 4:22,166,404-22,170,545 | - | C1H4g19931 | CX4g034378 | LOC_Os04g43300 | Os04g0512400 | - | Detail |
| C2H4g10802 | 4:22,172,829-22,173,224 | - | C1H4g27340 | CX4g035063 | LOC_Os04g43310 | Os04g0512500 | - | Detail |
| C2H4g29440 | 4:22,184,272-22,190,571 | - | C1H4g13563 | CX4g033268 | LOC_Os04g43340 | Os04g0512900 | - | Detail |
| C2H4g22415 | 4:22,184,726-22,185,187 | + | - | CX4g035431 | LOC_Os04g43324 | - | - | Detail |
| C2H4g12957 | 4:22,190,920-22,192,644 | + | C1H4g16567 | CX4g031530 | LOC_Os04g43350 | Os04g0513000 | - | Detail |
| C2H4g12895 | 4:22,194,127-22,194,520 | - | C1H4g14420 | - | LOC_Os04g43360 | Os04g0513100 | Os4BGlu14 | Detail |
| C2H4g23328 | 4:22,196,237-22,198,538 | - | C1H4g14420 | - | LOC_Os04g43360 | Os04g0513100 | Os4BGlu14 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |