| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17371 | 2:25,847,420-25,848,118 | + | C2H2g19834 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C1H2g00614 | 2:25,856,212-25,857,291 | - | C2H2g12350 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C1H2g03932 | 2:25,866,185-25,869,908 | - | C2H2g27051 | CX2g020860 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| C1H2g09273 | 2:25,873,513-25,878,112 | + | C2H2g04078 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C1H2g23248 | 2:25,878,364-25,879,010 | - | C2H2g07890 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C1H2g07518 | 2:25,883,906-25,884,217 | - | C2H2g23208 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C1H2g17890 | 2:25,884,777-25,887,874 | + | C2H2g03417 | CX2g023866 | LOC_Os02g45950 | - | - | Detail |
| C1H2g27881 | 2:25,888,496-25,889,416 | + | C2H2g24497 | CX2g019320 | - | - | - | Detail |
| C1H2g13117 | 2:25,894,999-25,895,906 | - | - | - | - | - | - | Detail |
| C1H2g27343 | 2:25,896,349-25,902,473 | + | C2H2g17403 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C1H2g11465 | 2:25,905,281-25,907,338 | + | C2H2g07817 | CX2g024528 | LOC_Os02g34860 | Os02g0117400 | - | Detail |
| C1H2g12344 | 2:25,909,079-25,910,160 | + | C2H7g03122 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C1H2g24305 | 2:25,912,920-25,915,548 | - | C2H2g27686 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C1H2g27920 | 2:25,926,682-25,929,229 | - | C2H2g27892 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C1H2g28250 | 2:25,931,714-25,936,860 | + | C2H2g03411 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C1H2g04547 | 2:25,949,272-25,953,342 | - | C2H2g06457 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C1H2g29736 | 2:25,953,694-25,958,766 | + | C2H2g09278 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C1H2g13130 | 2:25,961,734-25,962,164 | + | C2H2g01630 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C1H2g25245 | 2:25,963,062-25,967,242 | - | C2H2g28721 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C1H2g26309 | 2:25,974,048-25,974,414 | - | C2H2g18789 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22655 | 4:18,351,919-18,352,857 | - | C1H4g14575 | CX4g034540 | LOC_Os04g35300 | Os04g0432600 | - | Detail |
| C2H4g20356 | 4:18,354,135-18,356,123 | - | C1H4g23042 | CX4g035650 | LOC_Os04g35305 | Os04g0432800 | - | Detail |
| C2H4g07440 | 4:18,363,696-18,364,862 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35310 | Os04g0625600 | - | Detail |
| C2H4g18419 | 4:18,367,836-18,368,936 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35370 | Os04g0625600 | - | Detail |
| C2H4g22168 | 4:18,393,411-18,398,613 | + | C1H4g18234 | CX4g032398 | LOC_Os04g35380 | Os04g0433200 | - | Detail |
| C2H4g19405 | 4:18,405,988-18,407,176 | + | C1H4g24371 | CX4g032298 | LOC_Os04g35390 | Os04g0433300 | - | Detail |
| C2H4g16542 | 4:18,415,440-18,416,284 | - | - | CX4g034124 | - | - | - | Detail |
| C2H4g19627 | 4:18,420,191-18,424,424 | - | C1H4g04051 | CX4g033528 | LOC_Os04g35410 | Os04g0433600 | - | Detail |
| C2H4g01376 | 4:18,429,634-18,439,552 | - | C1H4g09671 | CX4g032013 | LOC_Os04g35420 | Os04g0433800 | OsRecQl4 | Detail |
| C2H4g24266 | 4:18,441,437-18,447,918 | - | C1H4g26209 | CX4g032480 | LOC_Os04g35430 | Os04g0433900 | - | Detail |
| C2H4g14516 | 4:18,458,990-18,462,658 | - | C1H4g16755 | CX4g036182 | LOC_Os04g35480 | Os04g0434300 | - | Detail |
| C2H4g03670 | 4:18,463,122-18,464,800 | + | C1H4g01137 | CX4g033477 | LOC_Os04g35490 | Os04g0434400 | - | Detail |
| C2H4g25515 | 4:18,468,880-18,469,746 | - | - | CX4g033142 | LOC_Os04g35500 | Os04g0434500 | - | Detail |
| C2H4g12666 | 4:18,479,928-18,491,060 | - | C1H4g18837 | CX4g033597 | LOC_Os04g35510 | Os04g0434600 | - | Detail |
| C2H4g00913 | 4:18,493,722-18,498,080 | - | C1H4g16208 | CX4g035656 | LOC_Os04g35520 | Os04g0434800 | OsAPX7, sAPX | Detail |
| C2H4g20243 | 4:18,501,386-18,506,382 | + | C1H4g09329 | CX4g035680 | LOC_Os04g35530 | Os04g0434900 | - | Detail |
| C2H4g06857 | 4:18,510,663-18,515,273 | + | C1H4g19761 | CX4g036436 | LOC_Os04g35540 | Os04g0435100 | - | Detail |
| C2H4g27190 | 4:18,518,883-18,534,264 | - | - | - | - | - | - | Detail |
| C2H4g24818 | 4:18,535,610-18,537,887 | - | C1H4g18209 | CX4g032696 | LOC_Os04g35560 | Os04g0435500 | - | Detail |
| C2H4g14359 | 4:18,551,659-18,556,886 | + | C1H4g19177 | CX4g035624 | LOC_Os04g35570 | Os04g0435700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |