| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17371 | 2:25,847,420-25,848,118 | + | C2H2g19834 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C1H2g00614 | 2:25,856,212-25,857,291 | - | C2H2g12350 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C1H2g03932 | 2:25,866,185-25,869,908 | - | C2H2g27051 | CX2g020860 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| C1H2g09273 | 2:25,873,513-25,878,112 | + | C2H2g04078 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C1H2g23248 | 2:25,878,364-25,879,010 | - | C2H2g07890 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C1H2g07518 | 2:25,883,906-25,884,217 | - | C2H2g23208 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C1H2g17890 | 2:25,884,777-25,887,874 | + | C2H2g03417 | CX2g023866 | LOC_Os02g45950 | - | - | Detail |
| C1H2g27881 | 2:25,888,496-25,889,416 | + | C2H2g24497 | CX2g019320 | - | - | - | Detail |
| C1H2g13117 | 2:25,894,999-25,895,906 | - | - | - | - | - | - | Detail |
| C1H2g27343 | 2:25,896,349-25,902,473 | + | C2H2g17403 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C1H2g11465 | 2:25,905,281-25,907,338 | + | C2H2g07817 | CX2g024528 | LOC_Os02g34860 | Os02g0117400 | - | Detail |
| C1H2g12344 | 2:25,909,079-25,910,160 | + | C2H7g03122 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C1H2g24305 | 2:25,912,920-25,915,548 | - | C2H2g27686 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C1H2g27920 | 2:25,926,682-25,929,229 | - | C2H2g27892 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C1H2g28250 | 2:25,931,714-25,936,860 | + | C2H2g03411 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C1H2g04547 | 2:25,949,272-25,953,342 | - | C2H2g06457 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C1H2g29736 | 2:25,953,694-25,958,766 | + | C2H2g09278 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C1H2g13130 | 2:25,961,734-25,962,164 | + | C2H2g01630 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C1H2g25245 | 2:25,963,062-25,967,242 | - | C2H2g28721 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C1H2g26309 | 2:25,974,048-25,974,414 | - | C2H2g18789 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23792 | 1:26,515,124-26,517,697 | + | C1H1g14515 | CX1g003297 | LOC_Os01g51720 | Os01g0715100 | - | Detail |
| C2H1g20184 | 1:26,518,055-26,519,469 | + | C1H1g00016 | - | LOC_Os01g51720 | Os01g0715100 | - | Detail |
| C2H1g18521 | 1:26,521,817-26,526,472 | + | C1H1g07797 | CX1g003297 | LOC_Os01g51740 | Os01g0715100 | - | Detail |
| C2H1g28881 | 1:26,534,722-26,543,205 | + | C1H1g31682 | CX1g005128 | LOC_Os01g51754 | Os01g0715400 | Amy4A | Detail |
| C2H1g22934 | 1:26,543,658-26,546,457 | - | C1H1g05597 | CX1g000411 | LOC_Os01g51770 | Os01g0715500 | OsVDAC4 | Detail |
| C2H1g29256 | 1:26,547,664-26,550,150 | - | C1H1g23520 | CX1g000857 | LOC_Os01g51780 | Os01g0715600 | - | Detail |
| C2H1g13241 | 1:26,556,196-26,557,899 | - | C1H1g20552 | CX1g006021 | LOC_Os01g51800 | Os01g0715800 | - | Detail |
| C2H1g07688 | 1:26,558,156-26,559,982 | - | C1H1g07070 | CX1g001623 | LOC_Os01g51810 | Os01g0715900 | - | Detail |
| C2H1g29741 | 1:26,565,252-26,570,314 | - | C1H1g22982 | CX1g000473 | LOC_Os01g51840 | Os01g0716200 | - | Detail |
| C2H1g28872 | 1:26,574,252-26,575,718 | - | C1H1g18068 | CX1g005778 | LOC_Os01g51850 | Os01g0716300 | - | Detail |
| C2H1g02860 | 1:26,575,958-26,578,885 | + | C1H1g01089 | CX1g002431 | LOC_Os01g51860 | Os01g0716400 | - | Detail |
| C2H1g19246 | 1:26,580,024-26,581,023 | + | C1H1g07333 | CX1g002037 | LOC_Os01g51870 | Os01g0716500 | - | Detail |
| C2H1g27639 | 1:26,590,792-26,596,826 | + | C1H1g10153 | CX1g000919 | LOC_Os01g51890 | Os01g0716800 | - | Detail |
| C2H1g10359 | 1:26,602,917-26,606,937 | - | C1H1g28089 | CX1g006507 | LOC_Os01g51920 | Os01g0717000 | - | Detail |
| C2H1g06050 | 1:26,623,138-26,625,953 | + | C1H1g24177 | CX1g002666 | LOC_Os01g51980 | Os01g0717400 | - | Detail |
| C2H1g05142 | 1:26,634,895-26,638,463 | - | - | - | - | - | - | Detail |
| C2H1g03035 | 1:26,643,534-26,648,093 | + | C1H1g16623 | CX1g004013 | LOC_Os01g52010 | Os01g0717700 | - | Detail |
| C2H1g24425 | 1:26,654,553-26,654,877 | + | C1H1g16623 | CX1g004013 | LOC_Os01g52010 | Os01g0717700 | - | Detail |
| C2H1g25952 | 1:26,675,607-26,679,500 | - | C1H1g02696 | CX1g002595 | LOC_Os01g52050 | Os01g0718300 | - | Detail |
| C2H1g19010 | 1:26,688,214-26,688,541 | + | C1H1g14248 | CX1g003113 | LOC_Os01g52060 | Os01g0718500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |