| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g17371 | 2:25,847,420-25,848,118 | + | C2H2g19834 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C1H2g00614 | 2:25,856,212-25,857,291 | - | C2H2g12350 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C1H2g03932 | 2:25,866,185-25,869,908 | - | C2H2g27051 | CX2g020860 | LOC_Os02g45900 | Os02g0684150 | OsDNA2_15 | Detail |
| C1H2g09273 | 2:25,873,513-25,878,112 | + | C2H2g04078 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C1H2g23248 | 2:25,878,364-25,879,010 | - | C2H2g07890 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C1H2g07518 | 2:25,883,906-25,884,217 | - | C2H2g23208 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C1H2g17890 | 2:25,884,777-25,887,874 | + | C2H2g03417 | CX2g023866 | LOC_Os02g45950 | - | - | Detail |
| C1H2g27881 | 2:25,888,496-25,889,416 | + | C2H2g24497 | CX2g019320 | - | - | - | Detail |
| C1H2g13117 | 2:25,894,999-25,895,906 | - | - | - | - | - | - | Detail |
| C1H2g27343 | 2:25,896,349-25,902,473 | + | C2H2g17403 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C1H2g11465 | 2:25,905,281-25,907,338 | + | C2H2g07817 | CX2g024528 | LOC_Os02g34860 | Os02g0117400 | - | Detail |
| C1H2g12344 | 2:25,909,079-25,910,160 | + | C2H7g03122 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C1H2g24305 | 2:25,912,920-25,915,548 | - | C2H2g27686 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C1H2g27920 | 2:25,926,682-25,929,229 | - | C2H2g27892 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C1H2g28250 | 2:25,931,714-25,936,860 | + | C2H2g03411 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C1H2g04547 | 2:25,949,272-25,953,342 | - | C2H2g06457 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C1H2g29736 | 2:25,953,694-25,958,766 | + | C2H2g09278 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C1H2g13130 | 2:25,961,734-25,962,164 | + | C2H2g01630 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C1H2g25245 | 2:25,963,062-25,967,242 | - | C2H2g28721 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C1H2g26309 | 2:25,974,048-25,974,414 | - | C2H2g18789 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g15738 | 6:5,352,658-5,356,103 | - | C1H6g29282 | CX6g044400 | LOC_Os06g11910 | Os06g0222800 | - | Detail |
| C2H6g10459 | 6:5,357,404-5,358,116 | - | C1H6g05758 | CX6g043189 | LOC_Os06g11920 | Os06g0222900 | - | Detail |
| C2H6g24071 | 6:5,358,386-5,360,424 | - | C1H6g02178 | CX6g043189 | LOC_Os06g11920 | Os06g0222900 | - | Detail |
| C2H6g18727 | 6:5,375,672-5,377,856 | - | C1H6g19373 | CX6g043681 | LOC_Os06g11960 | Os06g0223200 | - | Detail |
| C2H6g28885 | 6:5,379,291-5,382,956 | + | C1H6g01570 | CX6g043809 | LOC_Os06g11970 | Os06g0223300 | MADS63, OsMADS63 | Detail |
| C2H6g01453 | 6:5,400,470-5,401,751 | - | C1H6g15343 | CX6g043571 | LOC_Os06g11980 | Os06g0223700 | OsFLZ20 | Detail |
| C2H6g13530 | 6:5,407,525-5,418,572 | - | C1H6g09653 | CX6g041262 | LOC_Os06g11990 | Os06g0223800 | - | Detail |
| C2H6g07273 | 6:5,425,748-5,426,530 | - | C1H2g05316 | CX6g043703 | LOC_Os06g12000 | Os06g0224000 | - | Detail |
| C2H6g06279 | 6:5,434,141-5,437,800 | + | C1H6g19428 | CX6g043936 | LOC_Os06g12020 | Os06g0224100 | - | Detail |
| C2H6g26147 | 6:5,439,183-5,444,244 | - | C1H6g10448 | CX6g043259 | LOC_Os06g12030 | Os06g0224200 | - | Detail |
| C2H6g02483 | 6:5,451,959-5,453,140 | - | C1H6g11956 | CX6g043332 | LOC_Os06g12040 | Os06g0224400 | - | Detail |
| C2H6g17072 | 6:5,459,189-5,460,500 | + | - | - | - | - | - | Detail |
| C2H6g25780 | 6:5,460,523-5,460,922 | + | - | - | - | - | - | Detail |
| C2H6g27285 | 6:5,463,306-5,464,640 | - | C1H6g11956 | CX6g043332 | LOC_Os06g12060 | Os06g0224500 | - | Detail |
| C2H6g09495 | 6:5,467,154-5,468,374 | - | C1H6g11956 | CX6g043332 | LOC_Os06g12060 | Os06g0224650 | - | Detail |
| C2H6g16252 | 6:5,468,938-5,471,160 | - | C1H6g11956 | CX6g043332 | LOC_Os06g12070 | Os06g0224650 | - | Detail |
| C2H6g04707 | 6:5,475,627-5,476,763 | - | C1H6g11956 | CX6g043332 | LOC_Os06g12080 | Os06g0224900 | - | Detail |
| C2H6g08979 | 6:5,478,373-5,481,855 | + | C1H6g19819 | CX6g044231 | LOC_Os06g12090 | Os06g0225000 | OsSar1d | Detail |
| C2H6g02023 | 6:5,482,505-5,483,719 | - | C1H6g11956 | CX6g043332 | LOC_Os06g12100 | Os06g0225100 | - | Detail |
| C2H6g23713 | 6:5,485,344-5,486,525 | + | C1H6g11956 | CX6g043332 | LOC_Os06g12110 | Os06g0225200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |