| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g09656 | 2:25,611,619-25,616,781 | + | C2H2g03947 | CX2g023056 | LOC_Os02g45480 | Os02g0677700 | - | Detail |
| C1H2g23471 | 2:25,632,468-25,635,692 | + | C2H2g30651 | CX2g023900 | LOC_Os02g45520 | Os02g0678200 | OsSPX-MFS2 | Detail |
| C1H2g17027 | 2:25,637,753-25,639,597 | + | C2H2g20147 | CX2g021689 | LOC_Os02g45530 | Os02g0678300 | - | Detail |
| C1H2g17424 | 2:25,643,475-25,646,806 | + | C2H2g28524 | CX2g019478 | LOC_Os02g45540 | Os02g0678400 | - | Detail |
| C1H2g31789 | 2:25,656,138-25,656,975 | + | C2H2g12864 | CX2g024117 | LOC_Os02g45570 | Os02g0678800 | GRF10, OsGRF10 | Detail |
| C1H2g19674 | 2:25,661,045-25,664,225 | - | C2H2g08582 | CX2g024872 | LOC_Os02g45590 | Os02g0679200 | - | Detail |
| C1H2g00557 | 2:25,666,591-25,669,876 | + | C2H2g15385 | CX2g023865 | LOC_Os02g45600 | Os02g0679500 | - | Detail |
| C1H2g29949 | 2:25,683,869-25,689,661 | + | C2H2g12674 | CX2g022671 | LOC_Os02g45650 | Os02g0680400 | - | Detail |
| C1H2g04007 | 2:25,689,885-25,691,996 | + | C2H2g14527 | CX2g022671 | LOC_Os02g58330 | Os02g0833050 | - | Detail |
| C1H2g12850 | 2:25,692,547-25,700,025 | - | C2H2g14537 | CX2g019518 | LOC_Os02g45670 | Os02g0680700 | - | Detail |
| C1H2g25413 | 2:25,702,648-25,708,191 | + | C2H2g16883 | CX2g024588 | LOC_Os02g45690 | Os02g0681000 | - | Detail |
| C1H2g19356 | 2:25,708,223-25,709,885 | - | C2H2g10372 | CX2g023596 | LOC_Os02g45700 | Os02g0681100 | - | Detail |
| C1H2g14717 | 2:25,710,446-25,711,751 | - | - | CX6g043020 | - | - | - | Detail |
| C1H2g25085 | 2:25,713,755-25,714,399 | - | C2H2g21078 | CX2g023190 | LOC_Os02g45710 | Os02g0681200 | - | Detail |
| C1H2g25175 | 2:25,734,100-25,738,417 | + | C2H2g00552 | CX2g023369 | LOC_Os02g45750 | Os02g0681632 | - | Detail |
| C1H2g12840 | 2:25,777,795-25,785,013 | + | C2H2g03368 | CX2g021179 | LOC_Os02g45770 | Os02g0682200 | MFO1, OsMADS6, MADS6 | Detail |
| C1H2g27577 | 2:25,796,116-25,797,183 | - | C2H2g26786 | CX2g021503 | LOC_Os02g45810 | Os02g0682500 | OsTTG1 | Detail |
| C1H2g09245 | 2:25,797,872-25,799,691 | - | C2H2g15805 | CX2g020680 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| C1H2g11065 | 2:25,841,532-25,842,312 | + | C2H2g10983 | CX2g024060 | - | Os02g0530100 | - | Detail |
| C1H2g05780 | 2:25,844,095-25,847,076 | + | C2H2g09919 | CX2g019047 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g12888 | 5:1,454,303-1,458,741 | + | C1H5g06409 | CX5g038529 | - | Os05g0575400 | - | Detail |
| C2H5g25220 | 5:1,466,544-1,467,068 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g24745 | 5:1,471,155-1,472,263 | - | C1H5g14331 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C2H5g23667 | 5:1,478,681-1,480,492 | - | C1H5g16799 | - | - | - | - | Detail |
| C2H5g10940 | 5:1,485,921-1,486,759 | + | C1H5g11198 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C2H5g13765 | 5:1,487,425-1,491,486 | - | C1H5g15292 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C2H5g03241 | 5:1,493,234-1,494,460 | + | C1H3g03993 | CX5g037263 | LOC_Os12g34990 | Os03g0288300 | - | Detail |
| C2H5g20349 | 5:1,498,611-1,502,634 | + | C1H5g09306 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C2H5g12419 | 5:1,520,537-1,521,252 | + | - | - | LOC_Os05g03960 | Os05g0130300 | - | Detail |
| C2H5g28718 | 5:1,521,612-1,529,770 | - | C1H5g31896 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C2H5g08536 | 5:1,536,595-1,537,004 | - | C1H5g15210 | - | - | Os05g0130500 | - | Detail |
| C2H5g08634 | 5:1,538,539-1,539,316 | + | - | - | LOC_Os05g04000 | Os05g0130600 | - | Detail |
| C2H5g17204 | 5:1,541,642-1,546,148 | - | C1H5g13927 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C2H5g23034 | 5:1,546,919-1,547,381 | + | C1H5g19982 | CX5g038388 | - | - | - | Detail |
| C2H5g10179 | 5:1,548,863-1,550,139 | + | C1H5g21167 | - | - | - | - | Detail |
| C2H5g12456 | 5:1,556,561-1,559,128 | - | C1H5g11003 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C2H5g08847 | 5:1,561,924-1,566,163 | - | C1H5g23202 | - | LOC_Os05g04070 | Os05g0131401 | - | Detail |
| C2H5g12807 | 5:1,568,750-1,571,496 | - | C1H5g00064 | CX5g041042 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| C2H5g15022 | 5:1,573,614-1,581,468 | - | C1H5g06759 | CX5g037262 | - | - | - | Detail |
| C2H5g11311 | 5:1,588,305-1,591,921 | + | C1H5g22859 | CX5g040539 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |