| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g09656 | 2:25,611,619-25,616,781 | + | C2H2g03947 | CX2g023056 | LOC_Os02g45480 | Os02g0677700 | - | Detail |
| C1H2g23471 | 2:25,632,468-25,635,692 | + | C2H2g30651 | CX2g023900 | LOC_Os02g45520 | Os02g0678200 | OsSPX-MFS2 | Detail |
| C1H2g17027 | 2:25,637,753-25,639,597 | + | C2H2g20147 | CX2g021689 | LOC_Os02g45530 | Os02g0678300 | - | Detail |
| C1H2g17424 | 2:25,643,475-25,646,806 | + | C2H2g28524 | CX2g019478 | LOC_Os02g45540 | Os02g0678400 | - | Detail |
| C1H2g31789 | 2:25,656,138-25,656,975 | + | C2H2g12864 | CX2g024117 | LOC_Os02g45570 | Os02g0678800 | GRF10, OsGRF10 | Detail |
| C1H2g19674 | 2:25,661,045-25,664,225 | - | C2H2g08582 | CX2g024872 | LOC_Os02g45590 | Os02g0679200 | - | Detail |
| C1H2g00557 | 2:25,666,591-25,669,876 | + | C2H2g15385 | CX2g023865 | LOC_Os02g45600 | Os02g0679500 | - | Detail |
| C1H2g29949 | 2:25,683,869-25,689,661 | + | C2H2g12674 | CX2g022671 | LOC_Os02g45650 | Os02g0680400 | - | Detail |
| C1H2g04007 | 2:25,689,885-25,691,996 | + | C2H2g14527 | CX2g022671 | LOC_Os02g58330 | Os02g0833050 | - | Detail |
| C1H2g12850 | 2:25,692,547-25,700,025 | - | C2H2g14537 | CX2g019518 | LOC_Os02g45670 | Os02g0680700 | - | Detail |
| C1H2g25413 | 2:25,702,648-25,708,191 | + | C2H2g16883 | CX2g024588 | LOC_Os02g45690 | Os02g0681000 | - | Detail |
| C1H2g19356 | 2:25,708,223-25,709,885 | - | C2H2g10372 | CX2g023596 | LOC_Os02g45700 | Os02g0681100 | - | Detail |
| C1H2g14717 | 2:25,710,446-25,711,751 | - | - | CX6g043020 | - | - | - | Detail |
| C1H2g25085 | 2:25,713,755-25,714,399 | - | C2H2g21078 | CX2g023190 | LOC_Os02g45710 | Os02g0681200 | - | Detail |
| C1H2g25175 | 2:25,734,100-25,738,417 | + | C2H2g00552 | CX2g023369 | LOC_Os02g45750 | Os02g0681632 | - | Detail |
| C1H2g12840 | 2:25,777,795-25,785,013 | + | C2H2g03368 | CX2g021179 | LOC_Os02g45770 | Os02g0682200 | MFO1, OsMADS6, MADS6 | Detail |
| C1H2g27577 | 2:25,796,116-25,797,183 | - | C2H2g26786 | CX2g021503 | LOC_Os02g45810 | Os02g0682500 | OsTTG1 | Detail |
| C1H2g09245 | 2:25,797,872-25,799,691 | - | C2H2g15805 | CX2g020680 | LOC_Os02g45820 | Os02g0682600 | - | Detail |
| C1H2g11065 | 2:25,841,532-25,842,312 | + | C2H2g10983 | CX2g024060 | - | Os02g0530100 | - | Detail |
| C1H2g05780 | 2:25,844,095-25,847,076 | + | C2H2g09919 | CX2g019047 | LOC_Os02g45870 | Os02g0683900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |