| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g06339 | 2:24,894,120-24,896,273 | + | C2H2g14821 | CX2g024062 | LOC_Os02g44370 | Os02g0663100 | OsHAM2 | Detail |
| C1H2g09242 | 2:24,909,446-24,928,695 | - | C2H2g21975 | CX2g024718 | LOC_Os02g44380 | Os02g0663300 | - | Detail |
| C1H2g16152 | 2:24,933,878-24,935,437 | - | C2H2g15214 | CX2g024015 | LOC_Os02g44470 | Os02g0663800 | OsADF1 | Detail |
| C1H2g26889 | 2:24,936,157-24,938,157 | - | C2H2g17711 | CX2g023576 | LOC_Os02g44480 | Os02g0106300 | - | Detail |
| C1H2g29993 | 2:24,938,341-24,941,010 | - | C2H2g04975 | CX2g024801 | LOC_Os02g44490 | Os02g0663900 | - | Detail |
| C1H2g17275 | 2:24,944,711-24,947,057 | + | C2H2g10873 | CX2g024273 | LOC_Os02g44500 | Os02g0664000 | OsGPX3 | Detail |
| C1H2g24437 | 2:24,948,357-24,966,143 | + | C2H2g25029 | CX2g021198 | LOC_Os02g44510 | Os02g0664200 | - | Detail |
| C1H2g10239 | 2:24,967,456-24,984,846 | + | C2H2g14745 | CX2g022591 | LOC_Os02g44520 | Os02g0664300 | - | Detail |
| C1H2g10375 | 2:24,992,185-24,994,884 | - | C2H2g27518 | CX2g021479 | LOC_Os02g44530 | Os02g0664400 | - | Detail |
| C1H2g09205 | 2:24,999,250-25,004,988 | - | C2H2g15995 | CX2g019172 | LOC_Os02g44540 | Os02g0664700 | - | Detail |
| C1H2g31817 | 2:25,008,854-25,013,414 | + | C2H2g14456 | CX2g021823 | LOC_Os02g44570 | Os02g0665200 | - | Detail |
| C1H2g16388 | 2:25,022,049-25,029,724 | + | C2H2g07129 | CX2g024193 | LOC_Os02g44610 | Os02g0665500 | - | Detail |
| C1H2g24778 | 2:25,030,748-25,036,196 | + | C2H2g20045 | CX2g019593 | LOC_Os02g44610 | Os02g0665500 | - | Detail |
| C1H2g10501 | 2:25,031,581-25,036,623 | - | C2H2g27846 | - | - | Os02g0665600 | - | Detail |
| C1H2g05588 | 2:25,042,817-25,045,742 | + | C2H2g20848 | CX2g019966 | LOC_Os02g44630 | Os02g0666200 | - | Detail |
| C1H2g21155 | 2:25,047,198-25,057,094 | - | C2H2g17010 | CX2g022542 | LOC_Os02g44642 | Os02g0666300 | - | Detail |
| C1H2g04690 | 2:25,058,515-25,060,189 | + | - | CX2g019342 | - | Os02g0666550 | - | Detail |
| C1H2g19891 | 2:25,080,236-25,080,829 | + | C2H2g27502 | CX2g022367 | LOC_Os02g44670 | Os02g0666600 | - | Detail |
| C1H2g08536 | 2:25,084,250-25,085,866 | + | C2H2g03248 | CX2g022228 | LOC_Os02g44680 | Os02g0666700 | - | Detail |
| C1H2g05077 | 2:25,086,461-25,089,750 | - | C2H2g29413 | CX2g023682 | LOC_Os02g44690 | Os02g0666800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20318 | 4:23,380,102-23,380,731 | + | - | CX4g032986 | LOC_Os04g45834 | Os04g0542000 | OsS40-5 | Detail |
| C2H4g15404 | 4:23,387,657-23,390,558 | - | C1H4g01207 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C2H4g15215 | 4:23,390,655-23,391,125 | - | C1H4g01207 | CX4g036589 | LOC_Os04g45860 | Os04g0542200 | - | Detail |
| C2H4g05921 | 4:23,402,042-23,405,453 | - | C1H4g26797 | CX4g034574 | LOC_Os04g45900 | Os04g0542800 | YSL16, OsYSL16, Os-YSL16, OsYs14 | Detail |
| C2H4g03772 | 4:23,410,292-23,413,618 | + | C1H4g00917 | CX4g031872 | LOC_Os04g45910 | Os04g0542900 | - | Detail |
| C2H4g18044 | 4:23,413,925-23,415,547 | - | C1H4g12022 | CX4g033127 | LOC_Os04g45920 | Os04g0543000 | OsRLCK155 | Detail |
| C2H4g06135 | 4:23,429,014-23,433,474 | + | C1H4g12009 | CX4g031771 | LOC_Os04g45930 | Os04g0543200 | - | Detail |
| C2H4g28036 | 4:23,439,432-23,440,064 | + | C1H4g29842 | CX4g033722 | LOC_Os04g45940 | Os04g0543500 | - | Detail |
| C2H4g07566 | 4:23,442,911-23,446,114 | - | C1H4g23068 | CX4g033912 | LOC_Os04g45950 | Os04g0543600 | - | Detail |
| C2H4g03875 | 4:23,446,261-23,446,641 | - | C1H4g23068 | CX4g033912 | - | Os02g0655700 | - | Detail |
| C2H4g23324 | 4:23,449,934-23,454,406 | + | C1H4g25515 | CX4g032899 | LOC_Os04g45960 | Os04g0543700 | OsMSP | Detail |
| C2H4g27717 | 4:23,460,578-23,465,286 | + | C1H4g25512 | CX4g035856 | LOC_Os04g45970 | Os04g0543900 | - | Detail |
| C2H4g03252 | 4:23,470,363-23,470,812 | + | - | CX4g032582 | LOC_Os04g45980 | Os04g0544000 | - | Detail |
| C2H4g24460 | 4:23,473,283-23,475,811 | - | C1H4g13260 | CX4g031976 | LOC_Os04g45990 | Os04g0544100 | SDG703 | Detail |
| C2H4g09721 | 4:23,481,284-23,483,216 | - | C1H4g05097 | CX4g031985 | LOC_Os04g46000 | Os04g0544200 | OsCYCP4;4 | Detail |
| C2H4g14132 | 4:23,485,628-23,487,989 | - | C1H4g03288 | CX4g036665 | LOC_Os04g46010 | Os04g0544400 | - | Detail |
| C2H4g05003 | 4:23,489,787-23,493,126 | - | C1H4g26782 | CX4g032526 | LOC_Os04g46020 | Os04g0544500 | - | Detail |
| C2H4g02497 | 4:23,503,765-23,510,671 | - | C1H4g29118 | CX4g034792 | LOC_Os04g46050 | Os04g0544900 | - | Detail |
| C2H4g17284 | 4:23,511,983-23,513,401 | - | C1H4g17617 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| C2H4g22662 | 4:23,516,885-23,517,627 | - | C1H4g13000 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |