| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g06339 | 2:24,894,120-24,896,273 | + | C2H2g14821 | CX2g024062 | LOC_Os02g44370 | Os02g0663100 | OsHAM2 | Detail |
| C1H2g09242 | 2:24,909,446-24,928,695 | - | C2H2g21975 | CX2g024718 | LOC_Os02g44380 | Os02g0663300 | - | Detail |
| C1H2g16152 | 2:24,933,878-24,935,437 | - | C2H2g15214 | CX2g024015 | LOC_Os02g44470 | Os02g0663800 | OsADF1 | Detail |
| C1H2g26889 | 2:24,936,157-24,938,157 | - | C2H2g17711 | CX2g023576 | LOC_Os02g44480 | Os02g0106300 | - | Detail |
| C1H2g29993 | 2:24,938,341-24,941,010 | - | C2H2g04975 | CX2g024801 | LOC_Os02g44490 | Os02g0663900 | - | Detail |
| C1H2g17275 | 2:24,944,711-24,947,057 | + | C2H2g10873 | CX2g024273 | LOC_Os02g44500 | Os02g0664000 | OsGPX3 | Detail |
| C1H2g24437 | 2:24,948,357-24,966,143 | + | C2H2g25029 | CX2g021198 | LOC_Os02g44510 | Os02g0664200 | - | Detail |
| C1H2g10239 | 2:24,967,456-24,984,846 | + | C2H2g14745 | CX2g022591 | LOC_Os02g44520 | Os02g0664300 | - | Detail |
| C1H2g10375 | 2:24,992,185-24,994,884 | - | C2H2g27518 | CX2g021479 | LOC_Os02g44530 | Os02g0664400 | - | Detail |
| C1H2g09205 | 2:24,999,250-25,004,988 | - | C2H2g15995 | CX2g019172 | LOC_Os02g44540 | Os02g0664700 | - | Detail |
| C1H2g31817 | 2:25,008,854-25,013,414 | + | C2H2g14456 | CX2g021823 | LOC_Os02g44570 | Os02g0665200 | - | Detail |
| C1H2g16388 | 2:25,022,049-25,029,724 | + | C2H2g07129 | CX2g024193 | LOC_Os02g44610 | Os02g0665500 | - | Detail |
| C1H2g24778 | 2:25,030,748-25,036,196 | + | C2H2g20045 | CX2g019593 | LOC_Os02g44610 | Os02g0665500 | - | Detail |
| C1H2g10501 | 2:25,031,581-25,036,623 | - | C2H2g27846 | - | - | Os02g0665600 | - | Detail |
| C1H2g05588 | 2:25,042,817-25,045,742 | + | C2H2g20848 | CX2g019966 | LOC_Os02g44630 | Os02g0666200 | - | Detail |
| C1H2g21155 | 2:25,047,198-25,057,094 | - | C2H2g17010 | CX2g022542 | LOC_Os02g44642 | Os02g0666300 | - | Detail |
| C1H2g04690 | 2:25,058,515-25,060,189 | + | - | CX2g019342 | - | Os02g0666550 | - | Detail |
| C1H2g19891 | 2:25,080,236-25,080,829 | + | C2H2g27502 | CX2g022367 | LOC_Os02g44670 | Os02g0666600 | - | Detail |
| C1H2g08536 | 2:25,084,250-25,085,866 | + | C2H2g03248 | CX2g022228 | LOC_Os02g44680 | Os02g0666700 | - | Detail |
| C1H2g05077 | 2:25,086,461-25,089,750 | - | C2H2g29413 | CX2g023682 | LOC_Os02g44690 | Os02g0666800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24219 | 3:9,407,341-9,407,955 | + | C1H3g00497 | CX3g025566 | LOC_Os03g18990 | Os03g0301900 | - | Detail |
| C2H3g19658 | 3:9,410,763-9,411,527 | + | C1H3g25455 | - | LOC_Os03g19000 | Os03g0301950 | PEX11-2, OsPEX11-2, OsPEX11-5 | Detail |
| C2H3g01269 | 3:9,412,970-9,415,375 | + | C1H3g00671 | - | LOC_Os03g19010 | Os03g0302000 | PEX11-3, OsPEX11-3, OsPEX11 | Detail |
| C2H3g16033 | 3:9,416,864-9,420,075 | + | C1H3g25691 | CX3g029358 | LOC_Os03g19020 | Os03g0302200 | OsHIRP1 | Detail |
| C2H3g22160 | 3:9,425,813-9,426,652 | + | C1H3g01186 | CX3g025355 | LOC_Os03g19040 | Os03g0302500 | - | Detail |
| C2H3g04749 | 3:9,429,430-9,431,816 | + | C1H3g04602 | CX3g031208 | LOC_Os03g19059 | Os03g0302700 | - | Detail |
| C2H3g01569 | 3:9,433,708-9,434,355 | + | C1H3g22154 | CX3g027498 | LOC_Os03g19070 | Os03g0302800 | - | Detail |
| C2H3g02069 | 3:9,448,181-9,452,673 | + | C1H3g20481 | CX3g029770 | LOC_Os03g19080 | Os03g0302900 | SSD1 | Detail |
| C2H3g07365 | 3:9,456,527-9,457,600 | + | C1H3g20097 | CX3g030525 | LOC_Os03g19090 | Os03g0303100 | - | Detail |
| C2H3g09593 | 3:9,465,902-9,472,378 | - | C1H3g25874 | CX3g027281 | LOC_Os03g19120 | Os03g0303500 | OsP1 | Detail |
| C2H3g00606 | 3:9,492,656-9,493,476 | - | C1H3g30781 | CX3g028949 | LOC_Os03g19170 | Os03g0304100 | - | Detail |
| C2H3g12534 | 3:9,496,523-9,503,702 | + | C1H3g08647 | CX3g027589 | LOC_Os03g19190 | Os03g0304400 | - | Detail |
| C2H3g09070 | 3:9,516,974-9,520,456 | - | C1H3g21470 | CX3g026232 | LOC_Os03g19200 | Os03g0304500 | - | Detail |
| C2H3g20134 | 3:9,542,594-9,545,448 | - | C1H3g06043 | - | LOC_Os03g19220 | Os03g0304800 | - | Detail |
| C2H3g11777 | 3:9,555,282-9,559,401 | - | C1H3g10550 | CX3g026365 | LOC_Os03g19240 | Os03g0305000 | - | Detail |
| C2H3g17079 | 3:9,561,884-9,565,492 | - | C1H3g05747 | CX3g028640 | LOC_Os03g19250 | Os03g0305100 | - | Detail |
| C2H3g13465 | 3:9,570,078-9,570,716 | - | C1H3g00125 | CX3g029782 | LOC_Os03g19260 | Os03g0305200 | - | Detail |
| C2H3g28502 | 3:9,578,640-9,579,512 | - | C1H3g18796 | CX3g028201 | LOC_Os03g19270 | Os03g0305400 | OsUSP3 | Detail |
| C2H3g12913 | 3:9,582,082-9,586,519 | + | C1H3g22639 | CX3g030535 | LOC_Os03g19280 | Os03g0305500 | ASL1, OsASL1.2, OsASL1, OsAL1, red1 | Detail |
| C2H3g24123 | 3:9,587,286-9,588,648 | + | C1H3g06291 | CX3g026844 | LOC_Os03g19290 | Os03g0305600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |