| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05854 | 2:24,113,140-24,117,694 | - | C2H2g09002 | CX2g023178 | LOC_Os02g43010 | Os02g0644000 | OsVPE3, REP-2 | Detail |
| C1H2g12524 | 2:24,118,233-24,122,633 | + | C2H2g00079 | CX2g022755 | LOC_Os02g43020 | Os02g0644100 | - | Detail |
| C1H2g05443 | 2:24,131,693-24,135,108 | - | C2H2g15622 | CX2g021698 | LOC_Os02g43040 | Os02g0644500 | OsATG13a | Detail |
| C1H2g08836 | 2:24,140,556-24,141,254 | - | C2H2g02399 | CX2g021900 | LOC_Os02g43120 | Os02g0645000 | - | Detail |
| C1H2g01413 | 2:24,145,393-24,151,404 | - | C2H2g04299 | CX2g023325 | LOC_Os02g43050 | Os02g0644400 | - | Detail |
| C1H2g28893 | 2:24,171,407-24,172,099 | - | C2H2g07056 | CX2g023648 | LOC_Os02g43120 | Os02g0645000 | - | Detail |
| C1H2g14943 | 2:24,174,378-24,180,595 | - | C2H2g08300 | CX2g019755 | LOC_Os02g43130 | Os02g0645100 | - | Detail |
| C1H2g17222 | 2:24,195,210-24,196,754 | + | C2H2g12947 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C1H2g19085 | 2:24,230,972-24,232,280 | + | C2H2g19622 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C1H2g22786 | 2:24,234,363-24,237,015 | + | C2H2g11300 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C1H2g07582 | 2:24,238,018-24,244,395 | - | C2H2g09061 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C1H2g05654 | 2:24,264,441-24,269,829 | + | C2H2g12985 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C1H2g13691 | 2:24,274,583-24,275,783 | - | C2H2g29445 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C1H2g15207 | 2:24,281,913-24,285,136 | - | C2H2g03827 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C1H2g10382 | 2:24,285,889-24,286,299 | - | C2H2g03827 | CX2g020713 | LOC_Os02g43300 | Os02g0104500 | - | Detail |
| C1H2g25916 | 2:24,322,971-24,323,840 | + | C2H2g11895 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C1H2g29202 | 2:24,328,411-24,332,712 | - | C2H2g11536 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C1H2g22654 | 2:24,337,420-24,343,643 | + | C2H2g04607 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C1H2g29127 | 2:24,344,406-24,345,088 | - | C2H2g04813 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C1H2g17207 | 2:24,350,005-24,354,750 | - | C2H2g23002 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30244 | 4:18,710,681-18,715,359 | - | C1H4g19312 | CX4g034259 | LOC_Os04g35864 | Os04g0439300 | - | Detail |
| C2H4g24953 | 4:18,725,715-18,728,177 | - | C1H4g13550 | CX4g033378 | LOC_Os04g35890 | Os04g0439600 | - | Detail |
| C2H4g26224 | 4:18,733,526-18,739,562 | - | C1H4g04660 | CX4g034675 | LOC_Os04g35900 | Os04g0439900 | - | Detail |
| C2H4g24074 | 4:18,740,852-18,742,983 | - | C1H4g14055 | CX4g032186 | LOC_Os04g35910 | Os04g0440000 | - | Detail |
| C2H4g23223 | 4:18,743,842-18,751,574 | - | C1H4g11650 | CX4g035576 | LOC_Os04g35920 | Os04g0440100 | - | Detail |
| C2H4g25260 | 4:18,758,346-18,760,251 | - | C1H4g19673 | CX4g035857 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C2H4g14486 | 4:18,763,381-18,766,808 | - | C1H4g00512 | CX4g035857 | LOC_Os04g35970 | Os04g0440400 | - | Detail |
| C2H4g19471 | 4:18,770,108-18,772,777 | - | C1H4g26868 | CX4g035857 | LOC_Os04g35970 | Os04g0440300 | - | Detail |
| C2H4g00509 | 4:18,774,673-18,776,738 | - | C1H4g06540 | CX4g035857 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C2H4g22564 | 4:18,795,162-18,797,140 | - | C1H4g31755 | CX4g035857 | LOC_Os04g35990 | Os04g0440300 | - | Detail |
| C2H4g01897 | 4:18,813,625-18,816,590 | + | C1H4g00191 | CX4g032281 | LOC_Os04g36030 | Os04g0441600 | - | Detail |
| C2H4g24357 | 4:18,817,236-18,822,075 | - | C1H4g13060 | CX4g035996 | LOC_Os04g36040 | Os04g0441800 | - | Detail |
| C2H4g29140 | 4:18,837,001-18,842,206 | - | C1H4g02511 | CX4g032297 | LOC_Os04g36050 | Os04g0441900 | - | Detail |
| C2H4g08658 | 4:18,854,299-18,859,918 | + | C1H4g15146 | CX4g031774 | LOC_Os04g36054 | Os04g0442000 | - | Detail |
| C2H4g05600 | 4:18,861,477-18,864,461 | + | C1H4g04027 | CX4g032848 | LOC_Os04g36058 | Os04g0442100 | - | Detail |
| C2H4g02031 | 4:18,865,270-18,871,356 | + | C1H4g03235 | CX4g032844 | LOC_Os04g36062 | Os04g0442200 | - | Detail |
| C2H4g03287 | 4:18,873,288-18,874,838 | - | C1H4g10758 | CX4g032393 | LOC_Os04g36070 | Os04g0442300 | OSRR1, OsRR1, rr1 | Detail |
| C2H4g22500 | 4:18,892,541-18,901,499 | - | C1H4g26146 | CX4g035405 | LOC_Os04g55210 | Os04g0644800 | - | Detail |
| C2H4g11490 | 4:18,908,819-18,911,759 | + | C1H4g15259 | CX4g034447 | LOC_Os04g36590 | Os04g0443000 | - | Detail |
| C2H4g12516 | 4:18,912,658-18,913,164 | - | - | CX4g033145 | LOC_Os04g36600 | Os04g0443200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |